Co-expression analysis

Gene ID Os05g0378900
Gene name
Homology with ArabidopsisSimilar to At1g67930: Golgi transport complex protein-related (HF=4e-7)
Module size 23 genes
NF 0.33
%ile 37.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.95Os05g0378900AK058213.1-Conserved hypothetical protein4e-7At1g67930Golgi transport complex protein-relatedO.I.H.G.S.X.
0.4762.30.95Os07g0608300AK073927.1-Esterase/lipase/thioesterase domain containingprotein1e-2At5g20520WAV2 (WAVY GROWTH 2)O.I.H.G.S.X.
0.4253.90.97Os11g0433500AK067849.1-Protein transport protein Sec23A (SEC23-relatedprotein A)1e-9At4g14160transport protein, putativeO.I.H.G.S.X.
0.4253.90.95Os01g0610500AK105469.1-Conserved hypothetical protein1e-14At3g05280integral membrane Yip1 family proteinO.I.H.G.S.X.
0.3948.30.96Os04g0502200AK066572.1-Conserved hypothetical protein1e-7At5g11040-O.I.H.G.S.X.
0.3948.30.97Os01g0708100AK101457.1-N-myristoyltransferase 1(N-myristoyltransferase-like protein)7e-14At5g57020NMT1 (MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE)O.I.H.G.S.X.
0.3236.30.96Os03g0112400AK063082.1-AP2 adaptor, appendage domain containing protein5e-2At5g22770alpha-ADR (alpha-adaptin)O.I.H.G.S.X.
0.3134.50.96Os08g0156700AK070710.1-VAP272e+0At4g00170vesicle-associated membrane family protein / VAMP family proteinO.I.H.G.S.X.
0.3032.70.97Os07g0496000AK111986.1-Nt-rab6 protein9e-68At2g44610RAB6AO.I.H.G.S.X.
0.2931.10.97Os04g0433900CB683883-Chromodomain helicase-DNA-binding protein Mi-2homolog (dMi-2)2e+0At4g16880disease resistance protein-relatedO.I.H.G.S.X.
0.2931.10.97Os03g0825700AK067902.1-Defective in exine formation6e-40At3g09090DEX1 (DEFECTIVE IN EXINE FORMATION 1)O.I.H.G.S.X.
0.2931.10.96Os01g0600200AU165696-Ser/Thr specific protein phosphatase 2A Bregulatory subunit beta isoform4e-37At1g17720ATB BETAO.I.H.G.S.X.
0.2931.10.96Os06g0167100AK059117.1-Gamma-adaptin, C-terminal domain containingprotein2e-33At1g60070binding / clathrin binding / protein binding / protein transporterO.I.H.G.S.X.
0.2931.10.97Os05g0461000AB042259.1-Clathrin adaptor complex, small chain familyprotein5e-1At4g08520clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.2831.10.96Os11g0174000AK072825.1-Adaptin, N-terminal domain containing protein2e-89At4g31480coatomer beta subunit, putative / beta-coat protein, putative / beta-COP, putativeO.I.H.G.S.X.
0.2727.50.97Os11g0181100AK100605.1-Nonaspanin (TM9SF) family protein2e-70At1g10950endomembrane protein 70, putativeO.I.H.G.S.X.
0.2625.60.97Os03g0783700AF443602.1-Clathrin assembly small subunit protein AP19(Clathrin assembly protein AP19, small subunit)5e-19At2g17380AP19O.I.H.G.S.X.
0.2625.60.96Os03g0130500AK058465.1-Calcium-binding EF-hand domain containing protein1e-10At1g20760calcium-binding EF hand family proteinO.I.H.G.S.X.
0.2524.10.97Os03g0227000AK068454.1-Coatomer gamma subunit (Gamma-coat protein)(Gamma-COP)1e-25At4g34450coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putativeO.I.H.G.S.X.
0.2422.40.97Os08g0248900AK073613.1-ADP-ribosylation factor 32e-46At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)O.I.H.G.S.X.
0.2422.40.97Os01g0511300AK069825.1-Proteasome component region PCI domain containingprotein2e-13At4g1900626S proteasome regulatory subunit, putative (RPN9)O.I.H.G.S.X.
0.2321.20.97Os06g0143900AK111584.1-Coatomer protein complex, beta prime6e-99At1g52360coatomer protein complex, subunit beta 2 (beta prime), putativeO.I.H.G.S.X.
0.2219.40.96Os08g0550100AK058374.1-Proteasome component region PCI domain containingprotein3e-28At1g20200EMB2719 (EMBRYO DEFECTIVE 2719)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.198.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.598.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.197.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.697.3GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0711GO:0006461The aggregation, arrangement and bonding together of a set of components to form a protein complex.Link to AmiGO
0.0704GO:0006886The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.Link to AmiGO
0.0562GO:0007264Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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