Co-expression analysis

Gene ID Os05g0258400
Gene name
Homology with ArabidopsisSimilar to At1g53430: leucine-rich repeat family protein / protein kinase family protein (HF=2e-11)
Module size 23 genes
NF 0.56
%ile 76.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7993.60.84Os05g02584009633.m01517-Protein kinase domain containing protein2e-11At1g53430leucine-rich repeat family protein / protein kinase family proteinO.I.H.G.S.X.
0.6887.50.88Os05g0596500AK070817.1-Zn-finger, RING domain containing protein7e-1At5g63480unknown proteinO.I.H.G.S.X.
0.6683.90.88Os01g0678800AK062840.1-Heavy metal transport/detoxification proteindomain containing protein3e-1At1g20220nucleic acid bindingO.I.H.G.S.X.
0.6683.90.84Os09g0447500AK110565.1-Cytochrome P450 family protein6e-2At1g13110CYP71B7O.I.H.G.S.X.
0.6583.80.88Os08g01087009636.m00070-Conserved hypothetical protein9e-2At3g21260glycolipid transfer protein-relatedO.I.H.G.S.X.
0.6583.80.91Os09g0280500AK106988.1-Basic-leucine zipper (bZIP) transcription factordomain containing protein7e-2At3g12250TGA6 (TGACG MOTIF-BINDING FACTOR 6)O.I.H.G.S.X.
0.6583.80.88Os07g0421300AK121014.1-Glycoside hydrolase, family 31 protein7e-15At3g23640HGL1 (heteroglycan glucosidase 1)O.I.H.G.S.X.
0.6483.40.87Os03g0216700AK101556.1-Multi antimicrobial extrusion protein MatE familyprotein2e-2At5g65160tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.6079.70.88Os12g01832009640.m00762-3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)(3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase)(DPNPase)3e-2At5g639903'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeO.I.H.G.S.X.
0.5877.00.88Os12g0639200AK122160.1-AAA ATPase, central region domain containingprotein4e-3At4g05380AAA-type ATPase family proteinO.I.H.G.S.X.
0.5777.00.88Os07g01930009635.m00915-HIPL1 protein precursor3e-1At5g62630HIPL2 (HIPL2 PROTEIN PRECURSOR)O.I.H.G.S.X.
0.5573.70.88Os02g08208009630.m05730-Protein of unknown function DUF296 domaincontaining protein3e-2At4g14465DNA-binding protein-relatedO.I.H.G.S.X.
0.5573.70.91Os01g0218100AK068593.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein1e+0At5g24890unknown proteinO.I.H.G.S.X.
0.5573.70.91Os06g0692100AK110293.1-Protein kinase domain containing protein1e-1At1g48480RKL1O.I.H.G.S.X.
0.5168.70.88Os02g0108800AK099951.1-Conserved hypothetical protein5e-2At1g04555unknown proteinO.I.H.G.S.X.
0.5068.00.88Os10g0323500AK071372.1-Beta-glucosidase1e-6At1g26560BGLU40 (BETA GLUCOSIDASE 40)O.I.H.G.S.X.
0.4762.30.86Os09g02935009637.m00942-BRASSINOSTEROID INSENSITIVE 1 precursor (EC2.7.1.37) (AtBRI1) (Brassinosteroid LRR receptor kinase)9e-15At3g13380BRL3 (BRI1-LIKE 3)O.I.H.G.S.X.
0.4660.90.89Os10g0390600AK107029.1-1-aminocyclopropane-1-carboxylate synthase familyprotein4e-7At1g72330ALAAT2 (ALANINE AMINOTRANSFERASE 2)O.I.H.G.S.X.
0.4458.10.90Os08g0477500AU033142-S.tuberosum patatin (Fragment)2e+0At1g28280VQ motif-containing proteinO.I.H.G.S.X.
0.4355.40.90Os01g0652300AK063136.1-Hypothetical protein5e+0At1g30475-O.I.H.G.S.X.
0.3948.30.88Os05g0489900AK070533.1-Calcium/calmodulin-dependent protein kinase2e-5At4g09570CPK4O.I.H.G.S.X.
0.3948.30.88Os03g0320100CF280794-Alpha-L-arabinofuranosidase, C-terminal domaincontaining protein1e-15At3g10740ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1)O.I.H.G.S.X.
0.3644.00.90Os02g0745100AK069842.1-NOD26-like membrane integral protein ZmNIP2-12e-1At4g17340TIP2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.299.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.999.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.797.8GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0301GO:0006418The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.Link to AmiGO
0.0121GO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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