Co-expression analysis

Gene ID Os05g0244500
Gene name
Homology with ArabidopsisSimilar to At2g42820: HVA22F (HVA22-LIKE PROTEIN F) (HF=4e+0)
Module size 7 genes
NF 0.43
%ile 54.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4660.90.85Os05g0244500AK064349.1-Glycoside hydrolase, family 5 protein4e+0At2g42820HVA22F (HVA22-LIKE PROTEIN F)O.I.H.G.S.X.
0.7793.10.88Os08g0445000AK106866.1-Zn-finger, RING domain containing protein1e-3At5g57750zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5676.30.88Os01g0262500AK071545.1-TRAM, LAG1 and CLN8 homology domain containingprotein4e-1At3g51110crooked neck protein, putative / cell cycle protein, putativeO.I.H.G.S.X.
0.4863.70.87Os01g0857600CB965854-Conserved hypothetical protein8e-2At4g17480palmitoyl protein thioesterase family proteinO.I.H.G.S.X.
0.4253.90.87Os05g0227600AY224438.1-Conserved hypothetical protein3e-6At2g24060translation initiation factor 3 (IF-3) family proteinO.I.H.G.S.X.
0.2727.50.89Os02g0158300AU162361-KpsF/GutQ family protein5e-13At3g54690sugar isomerase (SIS) domain-containing protein / CBS domain-containing proteinO.I.H.G.S.X.
0.2117.90.87Os06g0531900AK067909.1-Lipolytic enzyme, G-D-S-L family protein8e-1At3g16100ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
38.499.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
24.299.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
22.799.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.398.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.298.9GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
16.998.8GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.598.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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