Co-expression analysis

Gene ID Os05g0241400
Gene name
Homology with ArabidopsisSimilar to At4g19400: actin binding (HF=4e-1)
Module size 11 genes
NF 0.34
%ile 38.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5573.70.93Os05g0241400AK107803.1-Profilin/allergen family protein4e-1At4g19400actin bindingO.I.H.G.S.X.
0.5676.30.95Os01g0265900NM_188007.1-Translin family protein5e-7At2g03780translin family proteinO.I.H.G.S.X.
0.5068.00.94Os05g0277200AK110612.1-Conserved hypothetical protein3e+0At5g05670signal recognition particle bindingO.I.H.G.S.X.
0.3948.30.95Os11g0146500AK122002.1-SPla/RYanodine receptor SPRY domain containingprotein3e+0At5g14370-O.I.H.G.S.X.
0.3846.90.96Os04g0485400AK120649.1-Nucleotide-binding protein7e-47At5g50960NBP35 (NUCLEOTIDE BINDING PROTEIN 35)O.I.H.G.S.X.
0.3338.80.95Os07g0158200AK103532.1-TatD-related deoxyribonuclease family protein4e-8At3g52390tatD-related deoxyribonuclease family proteinO.I.H.G.S.X.
0.3236.30.95Os10g0141900AK106467.1-Queuine/other tRNA-ribosyltransferase familyprotein5e-2At1g15110phosphatidyl serine synthase family proteinO.I.H.G.S.X.
0.2625.60.94Os03g0343700AK102274.1-Brix domain containing protein5e-2At5g61770PPAN (PETER PAN-LIKE PROTEIN)O.I.H.G.S.X.
0.2524.10.95Os03g0654500AK066127.1--3e-4At1g28760unknown proteinO.I.H.G.S.X.
0.2321.20.95Os04g0438700AK060634.1-Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein3e+0At1g09030NF-YB4 (NUCLEAR FACTOR Y, SUBUNIT B4)O.I.H.G.S.X.
0.2117.90.94Os06g0144000AK068998.1-BRCT domain containing protein7e-1At1g54720early-responsive to dehydration protein-related / ERD protein-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.999.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
4.496.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.396.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.995.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.695.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.695.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.695.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.595.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.595.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.395.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1541GO:0006400The covalent alteration of one or more nucleotides within a tRNA molecule to produce a tRNA molecule with a sequence that differs from that coded genetically.Link to AmiGO
0.1541GO:0008616The chemical reactions and pathways resulting in the formation of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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