Co-expression analysis

Gene ID Os05g0237800
Gene name
Homology with ArabidopsisSimilar to At3g01760: lysine and histidine specific transporter, putative (HF=3e-3)
Module size 7 genes
NF 0.13
%ile 10.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.97Os05g02378009633.m01302--3e-3At3g01760lysine and histidine specific transporter, putativeO.I.H.G.S.X.
0.3541.70.97Os07g0657300AK072234.1-Conserved hypothetical protein7e-5At2g41640transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.1611.30.97Os02g07295009630.m04867-Conserved hypothetical protein4e+0At5g59150ATRABA2D (HOARABIDOPSIS RAB GTPASE HOMOLOG A2D)O.I.H.G.S.X.
0.127.20.98Os03g06362009631.m04195--2e+0At1g29060-O.I.H.G.S.X.
0.094.90.98Os06g0132200AK062713.1-Hypothetical protein2e+0At1g66400calmodulin-related protein, putativeO.I.H.G.S.X.
0.084.20.98Os03g05782339631.m03659--3e+0At5g44540tapetum-specific protein-relatedO.I.H.G.S.X.
0.042.00.98Os04g03504339632.m02668--1e+1At2g04690cellular repressor of E1A-stimulated genes (CREG) familyO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.899.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.198.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.397.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0411GO:0006865The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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