Co-expression analysis

Gene ID Os05g0179100
Gene name
Homology with ArabidopsisSimilar to At4g01895: systemic acquired resistance (SAR) regulator protein NIMIN-1-related (HF=8e-5)
Module size 6 genes
NF 0.04
%ile 2.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7391.10.77Os05g01791009633.m00764-Conserved hypothetical protein8e-5At4g01895systemic acquired resistance (SAR) regulator protein NIMIN-1-relatedO.I.H.G.S.X.
0.094.90.84Os04g0306400AK103443.1-Ribose 5-phosphate isomerase family protein4e-8At2g01290ribose-5-phosphate isomeraseO.I.H.G.S.X.
0.031.40.84Os02g0766700AK072062.1-Abscisic acid responsive elements-binding factor(ABA-responsive element binding protein 2) (AREB2)6e-5At2g36270ABI5 (ABA INSENSITIVE 5)O.I.H.G.S.X.
0.031.40.79Os01g0794100AK062404.1-Conserved hypothetical protein6e+0At4g16295SPH1 (S-PROTEIN HOMOLOGUE 1)O.I.H.G.S.X.
0.021.00.84Os03g0327100AK065989.1-NAM / CUC2-like protein3e-19At3g04060anac046 (Arabidopsis NAC domain containing protein 46)O.I.H.G.S.X.
0.021.00.79Os01g0711600AK099559.1-Protein of unknown function DUF778 family protein6e-7At2g26070RTE1 (REVERSION-TO-ETHYLENE SENSITIVITY1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.797.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.697.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.297.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.396.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.296.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.196.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.096.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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