Co-expression analysis

Gene ID Os05g0155800
Gene name
Homology with ArabidopsisSimilar to At5g39760: AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23) (HF=2e-1)
Module size 11 genes
NF 0.12
%ile 9.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4964.40.90Os05g01558009633.m00559--2e-1At5g39760AtHB23 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 23)O.I.H.G.S.X.
0.3236.30.92Os06g02649009634.m01544-Endonuclease/exonuclease/phosphatase familyprotein4e-1At1g73875endonuclease/exonuclease/phosphatase family proteinO.I.H.G.S.X.
0.3236.30.92Os12g05410009640.m03442-Lumazine-binding protein family protein2e+0At5g54530unknown proteinO.I.H.G.S.X.
0.2524.10.94Os08g0510800AK072063.1-Conserved hypothetical protein3e+0At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)O.I.H.G.S.X.
0.1915.10.93Os12g0290200AK112053.1--1e-14At5g50210QS (QUINOLINATE SYNTHASE)O.I.H.G.S.X.
0.127.20.92Os01g0605200NM_192680.1-DNL zinc finger domain containing protein1e-6At1g68730zinc finger (DNL type) family proteinO.I.H.G.S.X.
0.116.50.93Os03g0198900AK063273.1-Methyladenine glycosylase family protein7e-8At5g57970methyladenine glycosylase family proteinO.I.H.G.S.X.
0.105.70.93Os01g0104600AK100613.1-Light-mediated development protein DET1(Deetiolated1)7e-5At4g10180DET1 (DE-ETIOLATED 1)O.I.H.G.S.X.
0.073.70.91Os04g0466100AK064543.1-Cell division protein FtsH-like protein3e-7At3g02450cell division protein ftsH, putativeO.I.H.G.S.X.
0.063.00.93Os09g0383400AK103385.1-Helicase, C-terminal domain containing protein9e-5At1g59990DEAD/DEAH box helicase, putative (RH22)O.I.H.G.S.X.
0.042.00.92Os06g02132009634.m01074-The start codon is not identified.3e-11At4g33350chloroplast inner membrane import protein Tic22, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.798.1GSM304669Control for the stable mutant rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertionLink to GEO
7.897.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.297.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.997.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.797.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.097.0GSM304664Control for the stable mutant rice lineGSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertionLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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