Co-expression analysis

Gene ID Os05g0143800
Gene name
Homology with ArabidopsisSimilar to At2g46505: SDH4 (HF=1e+0)
Module size 6 genes
NF 0.66
%ile 89.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.90Os05g0143800AK106538.1-GH3 auxin-responsive promoter family protein1e+0At2g46505SDH4O.I.H.G.S.X.
0.9198.90.91Os08g01300009636.m00276-Conserved hypothetical protein1e-11At2g04305magnesium transporter CorA-like protein-relatedO.I.H.G.S.X.
0.7793.10.92Os04g0534200AK109583.1-Receptor kinase-like protein8e-4At5g41180leucine-rich repeat protein kinase, putativeO.I.H.G.S.X.
0.6787.20.91Os05g0148900AK120912.1-Glutathione-S-transferase 19E501e+0At1g03860ATPHB2 (PROHIBITIN 2)O.I.H.G.S.X.
0.6787.20.91Os02g04480009630.m02338-Protein of unknown function DUF296 domaincontaining protein8e-6At4g22810DNA-binding protein-relatedO.I.H.G.S.X.
0.3236.30.91Os12g0640700AK108649.1-N/apple PAN domain containing protein8e-1At5g44500small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.899.2GSM195224Suspension cellGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
15.898.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.598.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.098.6GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.298.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.798.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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