Co-expression analysis

Gene ID Os05g0141700
Gene name
Homology with ArabidopsisSimilar to At3g05170: phosphoglycerate/bisphosphoglycerate mutase family protein (HF=4e-8)
Module size 6 genes
NF 0.10
%ile 7.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.84Os05g0141700AK065644.1-Phosphoglycerate/bisphosphoglycerate mutase familyprotein4e-8At3g05170phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.5573.70.82Os07g0164800AK070973.1-Hypothetical protein2e-1At1g22230unknown proteinO.I.H.G.S.X.
0.1510.30.84Os04g0550200AK108473.1-Pathogenesis-related transcriptional factor andERF domain containing protein2e-6At2g35700ERF38 (ERF FAMILY PROTEIN 38)O.I.H.G.S.X.
0.138.20.84Os01g0600500BX927920-HAD-superfamily subfamily IB hydrolase,hypothetical 1 protein2e-3At1g73010phosphataseO.I.H.G.S.X.
0.042.00.84Os02g0789600AK112100.1-Quinonprotein alcohol dehydrogenase-like domaincontaining protein2e-8At3g19240-O.I.H.G.S.X.
0.042.00.83Os03g0199100AK069890.1-Protein of unknown function DUF677 family protein3e-1At2g36100integral membrane family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
54.599.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
39.299.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.098.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.398.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.298.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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