Co-expression analysis

Gene ID Os05g0135000
Gene name
Homology with ArabidopsisSimilar to At5g51890: peroxidase (HF=6e-1)
Module size 29 genes
NF 0.49
%ile 64.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.20.81Os05g0135000AK109054.1--6e-1At5g51890peroxidaseO.I.H.G.S.X.
0.6483.40.86Os07g0639400AK110555.1-Peroxidase 17e-4At4g36430peroxidase, putativeO.I.H.G.S.X.
0.6382.70.87Os01g0291500AK070443.1-Transferase family protein9e-4At3g62160transferase family proteinO.I.H.G.S.X.
0.6181.20.82Os10g0155100AK108770.1-Curculin-like (mannose-binding) lectin domaincontaining protein3e+0At3g04970zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.5978.00.86Os12g01832009640.m00762-3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)(3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase)(DPNPase)3e-2At5g639903'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putativeO.I.H.G.S.X.
0.5777.00.87Os02g0658100AB114830.1-Aquaporin TIP2.1 (Tonoplast intrinsic protein 2.1)(Delta-tonoplast intrinsic protein) (Delta-TIP)7e-19At3g16240DELTA-TIPO.I.H.G.S.X.
0.5471.90.88Os03g0103100AY466108.1-Physical impedance induced protein2e+0At3g51510unknown proteinO.I.H.G.S.X.
0.5471.90.88Os07g0421300AK121014.1-Glycoside hydrolase, family 31 protein7e-15At3g23640HGL1 (heteroglycan glucosidase 1)O.I.H.G.S.X.
0.5471.90.88Os08g0159700AK109080.1-Protein of unknown function DUF296 domaincontaining protein6e-1At2g41225unknown proteinO.I.H.G.S.X.
0.5371.30.86Os02g0256200AB110701.1-Conserved hypothetical protein1e-1At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.5168.70.87Os05g0278500AK067851.1-Transferase family protein2e-1At1g06980unknown proteinO.I.H.G.S.X.
0.4964.40.88Os07g01930009635.m00915-HIPL1 protein precursor3e-1At5g62630HIPL2 (HIPL2 PROTEIN PRECURSOR)O.I.H.G.S.X.
0.4964.40.89Os01g0284500AF032974.1-Nectarin 1 precursor (EC 1.15.1.1) (Superoxidedismutase [Mn])7e-3At1g02335GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.)O.I.H.G.S.X.
0.4964.40.87Os11g0152700AK102690.1-Transcription factor HBP-1b(C38) (Fragment)3e-1At1g77920bZIP family transcription factorO.I.H.G.S.X.
0.4964.40.89Os02g0745100AK069842.1-NOD26-like membrane integral protein ZmNIP2-12e-1At4g17340TIP2O.I.H.G.S.X.
0.4762.30.88Os12g0639200AK122160.1-AAA ATPase, central region domain containingprotein4e-3At4g05380AAA-type ATPase family proteinO.I.H.G.S.X.
0.4558.80.81Os09g04091009637.m02088-Conserved hypothetical protein2e+0At5g51590DNA-binding protein-relatedO.I.H.G.S.X.
0.4458.10.87Os10g0555700U95968.1-Major pollen allergen Lol pI family protein3e+0At2g44310calcium-binding EF hand family proteinO.I.H.G.S.X.
0.4355.40.83Os10g0193100CA755860-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein1e+0At2g22800HAT9O.I.H.G.S.X.
0.4253.90.87Os03g0368900AK120411.1-Haem peroxidase, plant/fungal/bacterial familyprotein1e-2At5g64120peroxidase, putativeO.I.H.G.S.X.
0.4253.90.88Os01g0218100AK068593.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein1e+0At5g24890unknown proteinO.I.H.G.S.X.
0.4051.10.88Os09g0249000AK072805.1--6e-1At1g11220unknown proteinO.I.H.G.S.X.
0.4051.10.87Os02g0662000AK109149.1-RCc3 protein1e-1At2g25820transcription factorO.I.H.G.S.X.
0.3948.30.87Os04g0359100AK069384.1-Zinc-containing alcohol dehydrogenase superfamilyprotein2e+0At4g13010oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.3948.30.88Os05g0489900AK070533.1-Calcium/calmodulin-dependent protein kinase2e-5At4g09570CPK4O.I.H.G.S.X.
0.3948.30.86Os03g0245500AK064707.1-Curculin-like (mannose-binding) lectin domaincontaining protein1e+1At5g53560CB5-E (CYTOCHROME B5 ISOFORM E)O.I.H.G.S.X.
0.3948.30.86Os04g0684300AK105205.1-Hypothetical protein2e+1Atcg00560-O.I.H.G.S.X.
0.3541.70.86Os01g0591300AK101427.1-Cytosolic aldehyde dehydrogenase RF2D4e-6At3g24503ALDH2C4O.I.H.G.S.X.
0.3440.00.87Os06g0692100AK110293.1-Protein kinase domain containing protein1e-1At1g48480RKL1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
23.899.4GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.998.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.998.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0342GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO
0.0331GO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.Link to AmiGO
0.0121GO:0045449Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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