Co-expression analysis

Gene ID Os05g0113300
Gene name
Homology with ArabidopsisSimilar to At3g53720: ATCHX20 (CATION/H+ EXCHANGER 20) (HF=4e-4)
Module size 6 genes
NF 0.16
%ile 13.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5371.30.97Os05g0113300AK106443.1-Conserved hypothetical protein4e-4At3g53720ATCHX20 (CATION/H+ EXCHANGER 20)O.I.H.G.S.X.
0.4051.10.97Os10g01172009638.m00184--5e+0At5g51451unknown proteinO.I.H.G.S.X.
0.3541.70.97Os06g0561100CB622963--8e-1At3g44380-O.I.H.G.S.X.
0.3134.50.97Os11g06445009639.m03915-Transferase family protein3e+0At1g28450AGL58 (AGAMOUS-LIKE 58)O.I.H.G.S.X.
0.2727.50.97Os01g0363600NM_194015.1-Hydroxyethylthiazole kinase, monofunctional familyprotein7e+0At5g02120OHP (ONE HELIX PROTEIN)O.I.H.G.S.X.
0.052.50.97Os02g0738300AK108113.1-Conserved hypothetical protein1e-1At4g14695unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.798.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.698.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.208448.1.S1_at, orthologous to the query gene, Os05g0113300

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.4774.6PtpAffx.208448.1.S1_atAt3g53720cation proton exchanger-1e-12At3g17630ATCHX19 (CATION/H+ EXCHANGER 19)O.I.H.G.S.X.
0.6791.1PtpAffx.213114.1.S1_atAt3g53720hypothetical protein-2e-1At1g12150-O.I.H.G.S.X.
0.6187.0PtpAffx.215792.1.S1_s_atAt3g53720hypothetical protein-4e-18At2g15880leucine-rich repeat family protein / extensin family proteinO.I.H.G.S.X.
0.5683.9PtpAffx.221320.1.S1_atAt3g53720hypothetical protein-6e-1At4g25950VATG3 (vacuolar ATP synthase G3)O.I.H.G.S.X.
0.4067.0PtpAffx.216147.1.S1_s_atAt3g53720hypothetical protein-1e-12At4g31230protein kinase family proteinO.I.H.G.S.X.
0.2441.8PtpAffx.221348.1.S1_atAt3g53720hypothetical protein-9e-25At4g10010protein kinase family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



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