Co-expression analysis

Gene ID Os05g0113300
Gene name
Homology with ArabidopsisSimilar to At3g53720: ATCHX20 (CATION/H+ EXCHANGER 20) (HF=4e-4)
Module size 6 genes
NF 0.16
%ile 13.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5371.30.97Os05g0113300AK106443.1-Conserved hypothetical protein4e-4At3g53720ATCHX20 (CATION/H+ EXCHANGER 20)O.I.H.G.S.X.
0.4051.10.97Os10g01172009638.m00184--5e+0At5g51451unknown proteinO.I.H.G.S.X.
0.3541.70.97Os06g0561100CB622963--8e-1At3g44380-O.I.H.G.S.X.
0.3134.50.97Os11g06445009639.m03915-Transferase family protein3e+0At1g28450AGL58 (AGAMOUS-LIKE 58)O.I.H.G.S.X.
0.2727.50.97Os01g0363600NM_194015.1-Hydroxyethylthiazole kinase, monofunctional familyprotein7e+0At5g02120OHP (ONE HELIX PROTEIN)O.I.H.G.S.X.
0.052.50.97Os02g0738300AK108113.1-Conserved hypothetical protein1e-1At4g14695unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.798.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.698.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.998.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.898.0GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.20763.1.S1_s_at, orthologous to the query gene, Os05g0113300

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6GmaAffx.20763.1.S1_s_atAt3g53720--3e+0At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.2126.6GmaAffx.86770.1.S1_atAt3g53720--5e-15At1g4500026S proteasome regulatory complex subunit p42D, putativeO.I.H.G.S.X.
0.1721.2GmaAffx.87490.1.S1_atAt3g53720--1e+0At3g23635RTFL13 (ROTUNDIFOLIA LIKE 13)O.I.H.G.S.X.
0.1215.1Gma.9706.3.S1_x_atAt3g53720--2e-5At2g39840TOPP4O.I.H.G.S.X.
0.1114.2GmaAffx.93620.1.S1_s_atAt3g53720--3e-19At3g61140FUS6 (FUSCA 6)O.I.H.G.S.X.
0.069.0GmaAffx.60624.1.S1_atAt3g53720--4e+0At5g09450pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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