Co-expression analysis

Gene ID Os05g0106600
Gene name
Homology with ArabidopsisSimilar to At5g09810: ACT7 (ACTIN 7) (HF=0)
Module size 6 genes
NF 0.51
%ile 67.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.97Os05g0106600AK103340.1-Non-muscle actin0At5g09810ACT7 (ACTIN 7)O.I.H.G.S.X.
0.5371.30.96Os02g0167300D30717.1-Tubulin beta-3 chain (Beta-3 tubulin)3e-179At5g62700TUB3O.I.H.G.S.X.
0.5068.00.97Os05g0311000AK100520.1-Mu2 adaptin subunit (AP50) of AP2 domaincontaining protein3e-7At5g05010clathrin adaptor complexes medium subunit-relatedO.I.H.G.S.X.
0.5068.00.98Os05g0553700AK103396.1-Syntaxin 71 (AtSYP71)2e-19At3g09740SYP71 (SYNTAXIN OF PLANTS 71)O.I.H.G.S.X.
0.3846.90.97Os11g0247300AK105080.1-Tubulin alpha-1 chain (Alpha-1 tubulin)0At1g50010TUA2O.I.H.G.S.X.
0.2524.10.97Os04g0660400AK071012.1-Amylogenin2e-5At3g02230RGP1 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.998.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
11.698.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.997.0GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0771GO:0007018Movement of organelles, other microtubules and other particles along microtubules, mediated by motor proteins.Link to AmiGO
0.0771GO:0030244The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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