Co-expression analysis

Gene ID Os05g0106100
Gene name
Homology with ArabidopsisSimilar to At1g19910: AVA-P2 (HF=1e-38)
Module size 13 genes
NF 0.70
%ile 92.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.96Os05g0106100AK063178.1-Vacuolar ATP synthase 16 kDa proteolipid subunit(EC 3.6.3.14)1e-38At1g19910AVA-P2O.I.H.G.S.X.
0.8094.60.96Os10g0184300AK058856.1-Hypothetical protein1e-28At4g39080VHA-A3 (VACUOLAR PROTON ATPASE A3)O.I.H.G.S.X.
0.7993.60.97Os06g0662000AK071775.1-Vacuolar ATP synthase catalytic subunit A (EC3.6.3.14) (V-ATPase A subunit) (Vacuolar proton pumpalpha subunit) (V-ATPase 69 kDa subunit)0At1g78900VHA-A (VACUOLAR ATP SYNTHASE SUBUNIT A)O.I.H.G.S.X.
0.7692.20.97Os05g0593100AK061855.1-Vacuolar ATP synthase subunit C (EC 3.6.3.14)(V-ATPase C subunit) (Vacuolar proton pump C subunit)2e-10At1g12840DET3 (DE-ETIOLATED 3)O.I.H.G.S.X.
0.7491.40.97Os12g0168900AK071641.1--4e-51At4g38920ATVHA-C3 (VACUOLAR-TYPE H(+)-ATPASE C3)O.I.H.G.S.X.
0.7391.10.97Os11g0127700AK103742.1-Hypothetical protein2e-1At1g49480RTV1 (related to vernalization1 1)O.I.H.G.S.X.
0.7088.40.98Os11g0169900U27098.1-Vacuolar ATP synthase 16 kDa proteolipid subunit(EC 3.6.3.14) (V- ATPase 16 kDa proteolipid subunit)(Fragment)4e-63At1g75630AVA-P4O.I.H.G.S.X.
0.6483.40.97Os01g0610100AK059810.1-Vacuolar ATP synthase 21 kDa proteolipid subunit(EC 3.6.3.14) (23-kDa subunit of V-ATPase)4e-23At2g25610H+-transporting two-sector ATPase, C subunit family proteinO.I.H.G.S.X.
0.6181.20.97Os02g0586400L35845.1-Small GTP binding protein Rab27e-87At4g17170RABB1C (ARABIDOPSIS RAB GTPASE HOMOLOG B1C)O.I.H.G.S.X.
0.6181.20.97Os12g0123900AK061862.1-Hypothetical protein3e+0At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6079.70.98Os01g0587000AK067605.1-Vacuolar ATP synthase subunit d (EC 3.6.3.14)(V-ATPase d subunit) (Vacuolar proton pump d subunit)(V-ATPase 41 KDa accessory protein) (DVA41)2e-75At3g28710H+-transporting two-sector ATPase, putativeO.I.H.G.S.X.
0.5471.90.97Os05g0418000AK066648.1-GDP dissociation inhibitor protein OsGDI18e-32At3g59920ATGDI2 (RAB GDP DISSOCIATION INHIBITOR 2)O.I.H.G.S.X.
0.5168.70.97Os06g0568200AF375052.1-Vacuolar ATPase B subunit4e-111At1g20260hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanismO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.899.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.499.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.098.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2003GO:0006818The directed movement of hydrogen (H2 or H+), into, out of, within or between cells.Link to AmiGO
0.1431GO:0015988The transport of protons against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport.Link to AmiGO
0.0951GO:0043087Any process that modulates the rate of GTP hydrolysis by a GTPase.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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