Co-expression analysis

Gene ID Os04g0683800
Gene name
Homology with ArabidopsisSimilar to At3g57880: C2 domain-containing protein (HF=9e-15)
Module size 10 genes
NF 0.57
%ile 77.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4762.30.92Os04g0683800AK073897.1-Phosphoribosylanthranilate transferase-likeprotein9e-15At3g57880C2 domain-containing proteinO.I.H.G.S.X.
0.6787.20.94Os03g0758500AK059403.1-Plastocyanin-like domain containing protein2e+0At5g02160unknown proteinO.I.H.G.S.X.
0.6382.70.94Os04g0455600AK103788.1-Conserved hypothetical protein7e-7At4g39860unknown proteinO.I.H.G.S.X.
0.6181.20.95Os02g0760200AK063964.1-Conserved hypothetical protein1e-5At4g24610unknown proteinO.I.H.G.S.X.
0.5978.00.94Os05g0526400CR284436-Reticulon family protein4e+0At3g10260reticulon family proteinO.I.H.G.S.X.
0.5777.00.95Os03g0703100AK120790.1-Beta-glucosidase1e-3At3g18080BGLU44 (B-S GLUCOSIDASE 44)O.I.H.G.S.X.
0.5573.70.95Os06g0308300AK102553.1-65kD microtubule associated protein3e-29At5g55230ATMAP65-1 (MICROTUBULE-ASSOCIATED PROTEINS 65-1)O.I.H.G.S.X.
0.4863.70.95Os02g0767000AK122109.1-Remorin, C-terminal region domain containingprotein1e-9At4g36970remorin family proteinO.I.H.G.S.X.
0.4863.70.94Os02g0771700AK102185.1-Glycoside hydrolase, family 17 protein2e-2At3g57260BGL2 (BETA-1,3-GLUCANASE 2)O.I.H.G.S.X.
0.3338.80.96Os05g0535900AK101555.1-IQ calmodulin-binding region domain containingprotein1e+0At5g27690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.598.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.098.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.597.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.097.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.197.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage