Co-expression analysis

Gene ID Os04g0674600
Gene name
Homology with ArabidopsisSimilar to At3g17650: YSL5 (YELLOW STRIPE LIKE 5) (HF=2e-11)
Module size 14 genes
NF 0.57
%ile 76.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.80.96Os04g0674600AK069645.1-Oligopeptide transporter OPT superfamily protein2e-11At3g17650YSL5 (YELLOW STRIPE LIKE 5)O.I.H.G.S.X.
0.6987.90.98Os12g01345009640.m00322--2e+0At5g55570unknown proteinO.I.H.G.S.X.
0.6887.50.97Os04g03397009632.m02549--7e+0At4g10480nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.6583.80.97Os07g0287500XM_353878.1--4e-2At4g39900unknown proteinO.I.H.G.S.X.
0.6181.20.98Os08g02958009636.m01959--2e+1At5g62950catalytic/ nucleotide bindingO.I.H.G.S.X.
0.6079.70.97Os04g05005009632.m04029-Conserved hypothetical protein3e-1At1g02710glycine-rich proteinO.I.H.G.S.X.
0.5676.30.97Os02g08181009630.m05702--3e+0At2g31425enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.
0.5676.30.97Os09g03085009637.m01117-Disease resistance protein family protein9e-2At5g49170unknown proteinO.I.H.G.S.X.
0.5471.90.98Os10g05209009638.m03371--1e-1At1g71910unknown proteinO.I.H.G.S.X.
0.5269.60.97Os11g05746009639.m03306--5e+0At4g19645-O.I.H.G.S.X.
0.4355.40.97Os06g06709009634.m04466--1e-7At3g44720ADT4 (arogenate dehydratase 4)O.I.H.G.S.X.
0.4355.40.97Os01g0766800NM_191384.1--8e+0At5g43410ethylene-responsive factor, putativeO.I.H.G.S.X.
0.4253.90.97Os01g05974009629.m03958-Amino acid/polyamine transporter II family protein7e-1At4g35480RHA3BO.I.H.G.S.X.
0.3948.30.97Os03g06177009631.m04049-Conserved hypothetical protein2e-1At4g14000unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.999.7GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
13.098.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.698.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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