Co-expression analysis

Gene ID Os04g0650700
Gene name
Homology with ArabidopsisSimilar to At3g16150: L-asparaginase, putative / L-asparagine amidohydrolase, putative (HF=1e-1)
Module size 6 genes
NF 0.19
%ile 17.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.60.82Os04g0650700AK058733.1-L-asparaginase (L-asparagine amidohydrolase)1e-1At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeO.I.H.G.S.X.
0.4051.10.86Os03g0610800AK107194.1-Serpin3e+0At1g72416heat shock protein bindingO.I.H.G.S.X.
0.3541.70.81Os07g06544009635.m04629-BLE2 protein1e-1At2g34150WAVE1O.I.H.G.S.X.
0.1915.10.83Os06g0494400AK067594.1-Multi antimicrobial extrusion protein MatE familyprotein1e-3At5g52450MATE efflux protein-relatedO.I.H.G.S.X.
0.116.50.83Os06g0120200AK066196.1-Protein of unknown function DUF594 family protein3e-1At1g74560NRP1 (NAP1-RELATED PROTEIN 1)O.I.H.G.S.X.
0.094.90.83Os12g0438300AK067669.1-Disease resistance protein family protein3e+0At3g60090VQ motif-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
51.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
29.599.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.198.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.197.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.097.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.597.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.2001GO:0006516The chemical reactions and pathways resulting in the breakdown of glycoproteins, any protein that contains covalently bound glycose (i.e. monosaccharide) residues other than as a moiety of nucleic acid; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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