Co-expression analysis

Gene ID Os04g0644600
Gene name
Homology with ArabidopsisSimilar to At1g52510: hydrolase, alpha/beta fold family protein (HF=4e-21)
Module size 6 genes
NF 0.57
%ile 78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.96Os04g0644600AK099966.1-Epoxide hydrolase family protein4e-21At1g52510hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.7189.60.96Os08g0114100AK099560.1-Conserved hypothetical protein4e-27At1g64680unknown proteinO.I.H.G.S.X.
0.5068.00.98Os07g0171100AK066475.1-TPR-like domain containing protein2e-16At1g55480binding / protein bindingO.I.H.G.S.X.
0.4762.30.96Os04g0448600AK068709.1-ChaC-like protein family protein2e-3At1g44790ChaC-like family proteinO.I.H.G.S.X.
0.4762.30.96Os03g0704100AK070474.1-PAP fibrillin family protein2e+0At1g35410-O.I.H.G.S.X.
0.3948.30.96Os01g0912700AK068528.1-Conserved hypothetical protein1e-1At2g01340unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
76.899.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
33.999.8GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.697.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.197.7GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.297.4GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.197.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0631GO:0006725The chemical reactions and pathways involving aromatic compounds, any organic compound characterized by one or more planar rings, each of which contains conjugated double bonds and delocalized pi electrons, as carried out by individual cells.Link to AmiGO
0.0631GO:0007242A series of reactions within the cell that occur as a result of a single trigger reaction or compound.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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