Co-expression analysis

Gene ID Os04g0637000
Gene name
Homology with ArabidopsisSimilar to At5g65210: TGA1 (HF=4e-4)
Module size 15 genes
NF 0.43
%ile 53.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.80.87Os04g0637000AK066906.1-Basic leucine zipper protein (Liguleless2)4e-4At5g65210TGA1O.I.H.G.S.X.
0.6787.20.91Os04g0650900AK064480.1-Alpha-N-acetylglucosaminidase3e-14At5g13690alpha-N-acetylglucosaminidase family / NAGLU familyO.I.H.G.S.X.
0.5471.90.89Os05g0550300AK062463.1-Nonspecific lipid transfer protein1e+0At1g44790ChaC-like family proteinO.I.H.G.S.X.
0.4762.30.90Os12g0639600AK122084.1-Soluble quinoprotein glucose dehydrogenase domaincontaining protein2e-8At1g74790catalyticO.I.H.G.S.X.
0.4762.30.90Os02g0187800AK105011.2-Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195)(CAD) (Brown-midrib 1 protein)1e-2At3g19450ATCAD4O.I.H.G.S.X.
0.4660.90.91Os01g0260800AK071445.1-Conserved hypothetical protein4e-1At2g19270-O.I.H.G.S.X.
0.4253.90.91Os01g0231800AK062918.1-Conserved hypothetical protein2e+0At3g16220-O.I.H.G.S.X.
0.4051.10.90Os04g0415000AK108662.1-Conserved hypothetical protein1e-1At5g41761unknown proteinO.I.H.G.S.X.
0.3745.00.91Os08g0118000AK068379.1-HMG-I and HMG-Y, DNA-binding domain containingprotein2e-8At4g12080DNA-binding family proteinO.I.H.G.S.X.
0.3644.00.88Os02g0809800AK063181.1--5e-1At2g34140Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.3236.30.90Os01g0878800AK070251.1-Extradiol ring-cleavage dioxygenase, class IIIenzyme, subunit B domain containing protein4e-2At5g41440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3032.70.91Os01g0897600CA762923-Glycoside hydrolase, family 1 protein2e-7At5g36890BGLU42 (BETA GLUCOSIDASE 42)O.I.H.G.S.X.
0.2931.10.90Os02g0196600AK100988.1--1e-10At1g63440HMA5 (HEAVY METAL ATPASE 5)O.I.H.G.S.X.
0.2727.50.91Os09g0293400AK059627.1-Ubiquitin-conjugating enzyme E21e-10At5g56150UBC30 (ubiquitin-conjugating enzyme 30)O.I.H.G.S.X.
0.2625.60.90Os09g0249000AK072805.1--6e-1At1g11220unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.299.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.598.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.898.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.1251GO:0009809The chemical reactions and pathways resulting in the formation of lignins, a class of polymers formed by the dehydrogenetive radical polymerization of various phenylpropanoid monomers.Link to AmiGO
0.0911GO:0006825The directed movement of copper (Cu) ions into, out of, within or between cells.Link to AmiGO
0.0491GO:0015992The directed movement of protons (hydrogen ions) into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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