Co-expression analysis

Gene ID Os04g0623200
Gene name
Homology with ArabidopsisSimilar to At4g29230: anac075 (Arabidopsis NAC domain containing protein 75) (HF=4e-1)
Module size 6 genes
NF 0.46
%ile 59.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4051.10.86Os04g0623200AK105231.1-Conserved hypothetical protein4e-1At4g29230anac075 (Arabidopsis NAC domain containing protein 75)O.I.H.G.S.X.
0.6079.70.93Os06g0149100AK099064.1-Lipolytic enzyme, G-D-S-L family protein3e+0At5g22810GDSL-motif lipase, putativeO.I.H.G.S.X.
0.5777.00.91Os04g0305700AK068128.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein2e-1At2g43010PIF4 (phytochrome interacting factor 4)O.I.H.G.S.X.
0.4458.10.94Os01g0106300AK119550.1-Isoflavone reductase homolog IRL (EC 1.3.1.-)6e-1At2g34200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4051.10.91Os02g0646500AF148877.1-Aldehyde dehydrogenase domain containing protein4e+0At5g01830armadillo/beta-catenin repeat family protein / U-box domain-containing proteinO.I.H.G.S.X.
0.3032.70.90Os02g05894009630.m03609-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein1e-2At5g47080CKB1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.398.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.798.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.898.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.098.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.698.2GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.498.2GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.798.1GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0651GO:0006306The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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