Co-expression analysis

Gene ID Os04g0605500
Gene name
Homology with ArabidopsisSimilar to At3g21180: ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9) (HF=3e-30)
Module size 6 genes
NF 0.13
%ile 10.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4051.10.88Os04g0605500AK120057.1-Calcium-transporting ATPase 8, plasmamembrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 8)3e-30At3g21180ACA9 (AUTOINHIBITED CA(2+)-ATPASE 9)O.I.H.G.S.X.
0.4458.10.88Os05g0537400CF304349-Protein phosphatase 2C1e-2At5g10740protein phosphatase 2C-related / PP2C-relatedO.I.H.G.S.X.
0.2931.10.88Os01g0583100CA757691-Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C)(Abscisic acid- insensitive 2)2e-6At1g72770HAB1 (HOMOLOGY TO ABI1)O.I.H.G.S.X.
0.138.20.85Os01g0151600AK063435.1-Conserved hypothetical protein9e-10At5g59960unknown proteinO.I.H.G.S.X.
0.094.90.86Os02g0766700AK072062.1-Abscisic acid responsive elements-binding factor(ABA-responsive element binding protein 2) (AREB2)6e-5At2g36270ABI5 (ABA INSENSITIVE 5)O.I.H.G.S.X.
0.063.00.85Os11g0177400AK120669.1-ABC transporter related domain containing protein4e+0At4g03180unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
48.199.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.397.2GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
5.396.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.996.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.796.4GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.696.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.596.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.496.2GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.396.1GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.396.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0571GO:0006812The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells.Link to AmiGO
0.0381GO:0006470The process of removing one or more phosphoric residues from a protein.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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