Co-expression analysis

Gene ID Os04g0602100
Gene name
Homology with ArabidopsisSimilar to At4g09010: APX4 (ASCORBATE PEROXIDASE 4) (HF=2e-10)
Module size 6 genes
NF 0.47
%ile 60.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.96Os04g0602100AK121197.1-Haem peroxidase, plant/fungal/bacterial familyprotein2e-10At4g09010APX4 (ASCORBATE PEROXIDASE 4)O.I.H.G.S.X.
0.6382.70.95Os09g0517000AK067677.1-Conserved hypothetical protein3e-2At4g18205-O.I.H.G.S.X.
0.5573.70.96Os02g0834700AK061331.1-Conserved hypothetical protein YfcH family protein1e-8At2g21280SULAO.I.H.G.S.X.
0.4762.30.96Os08g0382400AK099874.1-Peptidyl-prolyl cis-trans isomerase, chloroplastprecursor (EC 5.2.1.8) (40 kDa thylakoid lumen PPIase)(40 kDa thylakoid lumen rotamase)4e-18At3g01480CYP38 (cyclophilin 38)O.I.H.G.S.X.
0.3134.50.95Os07g0469100AK120365.1-Thylakoid membrane phosphoprotein 14 kDa,chloroplast precursor7e+0At5g25240-O.I.H.G.S.X.
0.2931.10.96Os02g0553200AB114856.1-Thylakoid-bound ascorbate peroxidase2e-20At1g77490TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
43.799.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
28.299.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.199.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.398.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.198.3GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0241GO:0006457The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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