Co-expression analysis

Gene ID Os04g0591700
Gene name
Homology with ArabidopsisSimilar to At5g59845: gibberellin-regulated family protein (HF=7e+0)
Module size 6 genes
NF 0.61
%ile 82.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.21.00Os04g05917009632.m04881--7e+0At5g59845gibberellin-regulated family proteinO.I.H.G.S.X.
0.7189.60.99Os01g0255500NM_187903.1--1e+0At5g56880unknown proteinO.I.H.G.S.X.
0.6181.20.99Os01g08734009629.m06474--3e-1At3g27890NQR (NADPH:QUINONE OXIDOREDUCTASE)O.I.H.G.S.X.
0.5371.30.99Os08g05122009636.m04060--2e+0At1g05450protease inhibitor/seed storage/lipid transfer protein (LTP)-relatedO.I.H.G.S.X.
0.5371.30.99Os07g05094009635.m03198--6e+0At3g48209-O.I.H.G.S.X.
0.4253.90.99Os10g0563100NM_197763.1-Protein of unknown function DUF635 family protein3e+0At4g28730glutaredoxin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
35.399.8GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.699.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.799.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.698.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.398.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.498.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.298.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.298.8GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.198.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.098.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0281GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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