Co-expression analysis

Gene ID Os04g0588700
Gene name
Homology with ArabidopsisSimilar to At3g59140: ATMRP14 (HF=9e-6)
Module size 6 genes
NF 0.48
%ile 62.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.89Os04g0588700AK099941.1-ABC transporter, transmembrane region domaincontaining protein9e-6At3g59140ATMRP14O.I.H.G.S.X.
0.6181.20.87Os01g0680200AK121881.1--2e-1At1g54215proline-rich family proteinO.I.H.G.S.X.
0.5068.00.89Os12g0454800AY572461.1-Histidine kinase7e-3At5g10530lectin protein kinase, putativeO.I.H.G.S.X.
0.5068.00.89Os12g0490000CA762266-Mitochodrial transcription terminationfactor-related family protein5e+0At4g08170inositol 1,3,4-trisphosphate 5/6-kinase family proteinO.I.H.G.S.X.
0.4051.10.88Os01g07405009629.m05236-Transferrin receptor-like dimerisation regiondomain containing protein2e-5At3g54720AMP1 (ALTERED MERISTEM PROGRAM 1)O.I.H.G.S.X.
0.1915.10.87Os02g0579600AY177696.1-Transcription factor MADS277e-19At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.999.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.799.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.599.1GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.999.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.198.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.198.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.198.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.211985.1.S1_at, orthologous to the query gene, Os04g0588700

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9599.7PtpAffx.211985.1.S1_atAt3g59140multidrug resistance protein ABC transporter family-1e-44At3g60970ATMRP15O.I.H.G.S.X.
0.4268.6PtpAffx.52068.1.S1_atAt3g59140hypothetical protein-2e-36At2g31960ATGSL03 (GLUCAN SYNTHASE-LIKE 3)O.I.H.G.S.X.
0.3964.6PtpAffx.209791.1.S1_s_atAt3g59140hypothetical protein-3e-24At5g46410NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.3762.3PtpAffx.215595.1.S1_atAt3g59140hypothetical protein-6e-3At1g14680unknown proteinO.I.H.G.S.X.
0.3661.6PtpAffx.207530.1.S1_atAt3g59140hypothetical protein-6e-5At1g73970unknown proteinO.I.H.G.S.X.
0.3661.6PtpAffx.201264.1.S1_atAt3g59140hypothetical protein-3e+0At5g55390EDM2O.I.H.G.S.X.
0.3661.6PtpAffx.212933.1.S1_atAt3g59140hypothetical protein-6e-4At1g27060regulator of chromosome condensation (RCC1) family proteinO.I.H.G.S.X.
0.3559.7Ptp.7404.1.S1_atAt3g59140hypothetical protein-2e-28At4g11410short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.3458.3PtpAffx.87540.1.S1_atAt3g59140hypothetical protein-3e-18At3g12360ITN1 (INCREASED TOLERANCE TO NACL)O.I.H.G.S.X.
0.3357.5PtpAffx.124545.1.S1_s_atAt3g59140hypothetical protein-4e-26At2g43180catalyticO.I.H.G.S.X.
0.3255.2PtpAffx.157124.1.S1_atAt3g59140hypothetical protein-3e-11At5g51340unknown proteinO.I.H.G.S.X.
0.3052.0PtpAffx.105366.1.S1_s_atAt3g59140hypothetical protein-5e-12At4g15850ATRH1O.I.H.G.S.X.
0.3052.0PtpAffx.208377.1.S1_atAt3g59140chromatin remodeling complex subunit-0At3g06400CHR11 (CHROMATIN-REMODELING PROTEIN 11)O.I.H.G.S.X.
0.2950.5PtpAffx.201255.1.S1_atAt3g59140hypothetical protein-2e-1At3g20270lipid-binding serum glycoprotein family proteinO.I.H.G.S.X.
0.2950.5PtpAffx.210963.1.S1_atAt3g59140hypothetical protein-2e-26At3g05090transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2850.5PtpAffx.219799.1.S1_atAt3g59140hypothetical protein-3e-62At1g03910-O.I.H.G.S.X.
0.2850.5Ptp.2256.1.S1_s_atAt3g59140hypothetical protein-3e-15At1g05570CALS1 (CALLOSE SYNTHASE 1)O.I.H.G.S.X.
0.2850.5PtpAffx.23738.1.S1_s_atAt3g59140hypothetical protein-3e-2At5g61890AP2 domain-containing transcription factor family proteinO.I.H.G.S.X.
0.2747.1Ptp.7870.2.S1_atAt3g59140hypothetical protein-1e-53At1g65430zinc finger protein-relatedO.I.H.G.S.X.
0.2747.1PtpAffx.109438.2.S1_a_atAt3g59140hypothetical protein-2e-2At3g60030SPL12 (squamosa promoter-binding protein-like 12)O.I.H.G.S.X.
0.2645.2PtpAffx.207926.1.S1_atAt3g59140hypothetical protein-8e-102At3g17205UPL6 (UBIQUITIN PROTEIN LIGASE 6)O.I.H.G.S.X.
0.2645.2PtpAffx.27152.1.S1_s_atAt3g59140global transcription factor group /// global transcription factor group-1e-20At4g10710SPT16 (global transcription factor C)O.I.H.G.S.X.
0.2645.2PtpAffx.105080.1.S1_s_atAt3g59140hypothetical protein-5e-38At1g55680WD-40 repeat family proteinO.I.H.G.S.X.
0.2441.8PtpAffx.200586.1.S1_s_atAt3g59140hypothetical protein-5e-46At5g64550loricrin-relatedO.I.H.G.S.X.
0.2340.5PtpAffx.222869.1.S1_s_atAt3g59140hypothetical protein-3e-13At3g59580RWP-RK domain-containing proteinO.I.H.G.S.X.
0.2340.5PtpAffx.80799.2.S1_atAt3g59140hypothetical protein-1e+0At2g24060translation initiation factor 3 (IF-3) family proteinO.I.H.G.S.X.
0.2238.3PtpAffx.129345.1.A1_s_atAt3g59140hypothetical protein-1e-12At1g05180AXR1 (AUXIN RESISTANT 1)O.I.H.G.S.X.
0.2034.6PtpAffx.149265.1.S1_s_atAt3g59140hypothetical protein-3e-54At2g14260PIPO.I.H.G.S.X.
0.2034.6PtpAffx.1257.4.S1_atAt3g59140hypothetical protein-2e-30At1g16180TMS membrane family protein / tumour differentially expressed (TDE) family proteinO.I.H.G.S.X.
0.2034.6PtpAffx.204234.1.S1_s_atAt3g59140hypothetical protein-4e-24At4g15850ATRH1O.I.H.G.S.X.
0.1729.1Ptp.5420.1.S1_s_atAt3g59140hypothetical protein-2e-30At1g63770peptidase M1 family proteinO.I.H.G.S.X.
0.1729.1Ptp.1165.1.A1_atAt3g59140--1e+0At4g10430-O.I.H.G.S.X.
0.1626.9PtpAffx.160702.1.S1_s_atAt3g59140hypothetical protein-6e-1At1g24230paired amphipathic helix repeat-containing proteinO.I.H.G.S.X.
0.1626.9PtpAffx.42410.1.S1_s_atAt3g59140hypothetical protein-1e-20At1g64140-O.I.H.G.S.X.
0.1525.3PtpAffx.2002.1.S1_atAt3g59140--1e-3At1g71150unknown proteinO.I.H.G.S.X.
0.1423.5PtpAffx.207481.1.S1_atAt3g59140outward rectifying potassium channel-3e-2At5g55630ATKCO1O.I.H.G.S.X.
0.1423.5PtpAffx.5904.3.S1_s_atAt3g59140hypothetical protein-7e-3At3g58030zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.1423.5PtpAffx.22863.2.S1_a_atAt3g59140hypothetical protein-2e-27At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)O.I.H.G.S.X.
0.1321.6PtpAffx.83555.1.S1_s_atAt3g59140hypothetical protein-3e-4At1g14850NUP155O.I.H.G.S.X.
0.1321.6PtpAffx.496.1.S1_atAt3g59140hypothetical protein-2e-28At5g56680SYNC1O.I.H.G.S.X.
0.1118.1PtpAffx.12808.1.S1_s_atAt3g59140hypothetical protein-3e-33At1g43850SEU (seuss)O.I.H.G.S.X.
0.1118.1PtpAffx.14042.1.A1_s_atAt3g59140hypothetical protein-6e-3At5g27810sequence-specific DNA binding / transcription factorO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Triticum_aestivum
Vitis_vinifera
Zea_mays



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