Co-expression analysis

Gene ID Os04g0588700
Gene name
Homology with ArabidopsisSimilar to At3g59140: ATMRP14 (HF=9e-6)
Module size 6 genes
NF 0.48
%ile 62.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.89Os04g0588700AK099941.1-ABC transporter, transmembrane region domaincontaining protein9e-6At3g59140ATMRP14O.I.H.G.S.X.
0.6181.20.87Os01g0680200AK121881.1--2e-1At1g54215proline-rich family proteinO.I.H.G.S.X.
0.5068.00.89Os12g0454800AY572461.1-Histidine kinase7e-3At5g10530lectin protein kinase, putativeO.I.H.G.S.X.
0.5068.00.89Os12g0490000CA762266-Mitochodrial transcription terminationfactor-related family protein5e+0At4g08170inositol 1,3,4-trisphosphate 5/6-kinase family proteinO.I.H.G.S.X.
0.4051.10.88Os01g07405009629.m05236-Transferrin receptor-like dimerisation regiondomain containing protein2e-5At3g54720AMP1 (ALTERED MERISTEM PROGRAM 1)O.I.H.G.S.X.
0.1915.10.87Os02g0579600AY177696.1-Transcription factor MADS277e-19At3g57230AGL16 (AGAMOUS-LIKE 16)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.999.3GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.799.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
20.599.1GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
19.999.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.198.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.198.7GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.198.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage