Co-expression analysis

Gene ID Os04g0561500
Gene name
Homology with ArabidopsisSimilar to At1g76140: serine-type endopeptidase/ serine-type peptidase (HF=1e-19)
Module size 9 genes
NF 0.64
%ile 86.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8496.00.76Os04g0561500AK065953.1-Prolyl endopeptidase (EC 3.4.21.26) (Post-prolinecleaving enzyme) (PE)1e-19At1g76140serine-type endopeptidase/ serine-type peptidaseO.I.H.G.S.X.
0.7189.60.93Os06g0288200AK071127.1-Hypothetical protein8e-1At2g47400CP12-1O.I.H.G.S.X.
0.7189.60.94Os06g0102100AK099468.1-Cytochrome P450 family protein1e+0At5g46020unknown proteinO.I.H.G.S.X.
0.7189.60.94Os07g0510500AK068586.1-UDP-glucuronosyl/UDP-glucosyltransferase familyprotein4e-3At3g21800UGT71B8 (UDP-GLUCOSYL TRANSFERASE 71B8)O.I.H.G.S.X.
0.6483.40.90Os12g0115700AK099443.1-Chalcone-flavanone isomerase family protein3e+0At4g04745unknown proteinO.I.H.G.S.X.
0.6382.70.91Os02g0697400AK105636.1-4-coumarate--CoA ligase 2 (EC 6.2.1.12) (4CL 2)(4-coumaroyl-CoA synthase 2)8e-5At1g650604CL3O.I.H.G.S.X.
0.6382.70.93Os02g0589000AK066288.1-Lecithin:cholesterol acyltransferase familyprotein8e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.4355.40.88Os08g0375400AK108186.1-Plant disease resistance response protein familyprotein6e+0At5g61030GR-RBP3 (glycine-rich RNA-binding protein 3)O.I.H.G.S.X.
0.1915.10.89Os04g0101400AK100972.1-Cytochrome P450 family protein1e-2At5g06900CYP93D1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.998.1GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.398.1GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.397.9GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.097.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.697.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.597.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.097.4GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0651GO:0009620A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.Link to AmiGO
0.0421GO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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