| Gene ID | Os04g0558900 |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g59810: SBT5.4 (HF=6e-3) |
| Module size | 6 genes |
| NF | 0.75 |
| %ile | 96.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.9 | 0.99 | Os04g0558900 | AK100861.1 | - | Proteinase inhibitor I9, subtilisin propeptidedomain containing protein | 6e-3 | At5g59810 | SBT5.4 | O.I. | H.G. | S.X. | |
| 0.80 | 94.6 | 0.99 | Os04g0456100 | AK070866.1 | - | Hypothetical protein | 6e+0 | At5g60800 | heavy-metal-associated domain-containing protein | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.98 | Os06g0336500 | AK072260.1 | - | CSLD2 (Fragment) | 1e-10 | At2g33100 | ATCSLD1 | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.99 | Os01g0939100 | AK070064.1 | - | Calmodulin-stimulated calcium-ATPase | 2e-16 | At3g57330 | ACA11 (autoinhibited Ca2+-ATPase 11) | O.I. | H.G. | S.X. | |
| 0.60 | 79.7 | 0.99 | Os05g0590100 | AK072823.1 | - | Ubiquitin domain containing protein | 8e-5 | At2g46500 | phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.99 | Os04g0101700 | AK069225.1 | - | Engulfment and cell motility, ELM domaincontaining protein | 4e-8 | At1g03620 | phagocytosis and cell motility protein ELMO1-related | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 11.8 | 98.3 | GSM429984 | Rice wild-type panicle rep2 | GSE17194 | Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle | |
| 5.4 | 96.8 | GSM278846 | WuYun3-RSV infected, biological rep3 | GSE11025 | Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection | |
| 5.4 | 96.8 | GSM278849 | WuYun3-non-infected, biological rep3 | GSE11025 | Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection | |
| 5.4 | 96.8 | GSM429982 | Rice wild-type panicle rep1 | GSE17194 | Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle | |
| 5.2 | 96.7 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 4.3 | 96.1 | GSM377073 | Genomic DNA - 45 day old leaf sample - mutant d2943 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 4.3 | 96.1 | GSM278853 | KT95-418-non-infected, biological rep1 | GSE11025 | Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection | |
| 4.1 | 96.0 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 4.1 | 96.0 | GSM377080 | Genomic DNA - 45 day old leaf sample - mutant g6728 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 3.8 | 95.7 | GSM377077 | Genomic DNA - 45 day old leaf sample - mutant g6489 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.250 | 1 | GO:0006909 | The process whereby phagocytes engulf external particulate material. The particles are initially contained within phagocytic vacuoles (phagosomes), which then fuse with primary lysosomes to effect digestion of the particles. |  |
| 0.077 | 1 | GO:0030244 | The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation. | |
| 0.057 | 1 | GO:0006812 | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of, within or between cells. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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