| Gene ID | Os04g0518100 |
| Gene name | |
| Homology with Arabidopsis | Similar to At3g10340: PAL4 (Phenylalanine ammonia-lyase 4) (HF=2e-11) |
| Module size | 9 genes |
| NF | 0.30 |
| %ile | 31.4 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 87.2 | 0.88 | Os04g0518100 | AK100346.1 | - | Phenylalanine ammonia-lyase | 2e-11 | At3g10340 | PAL4 (Phenylalanine ammonia-lyase 4) | O.I. | H.G. | S.X. | |
| 0.52 | 69.6 | 0.91 | Os03g0389700 | AB122057.1 | - | Phospho-2-dehydro-3-deoxyheptonate aldolase 1,chloroplast precursor (EC 2.5.1.54)(Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHPsynthetase 1) (3-deoxy-D-arabino-heptulosonate7-phosphate synthase 1) | 2e-42 | At1g22410 | 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.95 | Os05g0168500 | AK100711.1 | - | Nonaspanin (TM9SF) family protein | 2e-27 | At4g12650 | - | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | 0.94 | Os02g0735200 | AK071969.1 | - | Glutamine synthetase shoot isozyme (EC 6.3.1.2)(Glutamate--ammonia ligase) (Clone lambda-GS28) | 9e-78 | At3g17820 | ATGSKB6 | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | 0.93 | Os02g0329800 | AK070014.1 | - | Protein of unknown function DUF563 family protein | 3e-1 | At3g18170 | transferase, transferring glycosyl groups | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | 0.91 | Os02g0187800 | AK105011.2 | - | Cinnamyl-alcohol dehydrogenase (EC 1.1.1.195)(CAD) (Brown-midrib 1 protein) | 1e-2 | At3g19450 | ATCAD4 | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | 0.91 | Os04g0559200 | AK065763.1 | - | Conserved hypothetical protein | 2e+0 | At5g43480 | unknown protein | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | 0.93 | Os11g0455800 | AK101450.1 | - | Serine hydroxymethyltransferase (EC 2.1.2.1)(Serine methylase) (Glycine hydroxymethyltransferase)(SHMT) | 3e-68 | At4g13930 | SHM4 (serine hydroxymethyltransferase 4) | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | 0.91 | Os02g0626100 | AK121303.1 | - | Phenylalanine ammonia-lyase (EC 4.3.1.5) | 4e+0 | At2g03430 | ankyrin repeat family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 40.6 | 99.9 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 19.3 | 99.0 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 9.3 | 97.9 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.5 | 97.7 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.0 | 97.6 | GSM377082 | Genomic DNA - 45 day old leaf sample - mutant g9799 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.6 | 97.5 | GSM377084 | Genomic DNA - 45 day old leaf sample - mutant f1856 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.5 | 97.5 | GSM377077 | Genomic DNA - 45 day old leaf sample - mutant g6489 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.3 | 97.5 | GSM377076 | Genomic DNA - 45 day old leaf sample - mutant g6485 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.3 | 97.5 | GSM377080 | Genomic DNA - 45 day old leaf sample - mutant g6728 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 7.2 | 97.4 | GSM377078 | Genomic DNA - 45 day old leaf sample - mutant g6603 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.200 | 1 | GO:0009809 | The chemical reactions and pathways resulting in the formation of lignins, a class of polymers formed by the dehydrogenetive radical polymerization of various phenylpropanoid monomers. |  |
| 0.154 | 1 | GO:0009423 | The chemical reactions and pathways resulting in the formation of the unsymmetrical ether derived from phosphoenolpyruvate and 5-phosphoshikimic acid formed as an intermediate in the biosynthesis of aromatic amino acids and many other compounds. | |
| 0.154 | 1 | GO:0033587 | The chemical reactions and pathways resulting in the formation of shikimate, (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate, the anion of shikimic acid. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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