Co-expression analysis

Gene ID Os04g0491500
Gene name
Homology with ArabidopsisSimilar to At4g21680: proton-dependent oligopeptide transport (POT) family protein (HF=2e-2)
Module size 6 genes
NF 0.46
%ile 58.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.93Os04g0491500AK101116.1-TGF-beta receptor, type I/II extracellular regionfamily protein2e-2At4g21680proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.5068.00.93Os01g0551800NM_193415.1-Conserved hypothetical protein2e-3At5g24310ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)O.I.H.G.S.X.
0.4660.90.93Os02g0715000AK060534.1-Cysteine proteinase GP-II (EC 3.4.22.-)4e-5At1g20850XCP2 (xylem cysteine peptidase 2)O.I.H.G.S.X.
0.4051.10.93Os10g01144009638.m00154-Protein kinase domain containing protein5e-10At2g01950BRL2 (BRI1-LIKE 2)O.I.H.G.S.X.
0.4051.10.93Os12g0512400AK065758.1-Hypothetical protein2e+0At5g01430Got1-like family proteinO.I.H.G.S.X.
0.2117.90.93Os12g0118900AK062692.1-Cytochrome P450 family protein1e-7At5g08139zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5573.70.88Os03g0810100AK070756.1-Isopentenyl transferase-like domain containingprotein8e-1At1g20470auxin-responsive family proteinO.I.H.G.S.X.
0.5068.00.93Os03g0817500AK111450.1-Protein of unknown function DUF231 domaincontaining protein1e-5At1g78710unknown proteinO.I.H.G.S.X.
0.4660.90.89Os06g0178700AK102979.1-Isopenicillin N synthase family protein3e+0At5g05270chalcone-flavanone isomerase family proteinO.I.H.G.S.X.
0.4458.10.91Os01g0279000AK119444.1-The start codon is not identified.4e-7At3g26935zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.4355.40.87Os11g02702019639.m01552--9e-2At5g25460unknown proteinO.I.H.G.S.X.
0.4355.40.91Os03g0624600AK062675.1-No apical meristem (NAM) protein domain containingprotein1e-2At5g18270ANAC087O.I.H.G.S.X.
0.4051.10.89Os04g0350700AK108605.1-Phytochrome-interacting factor 4 (Basichelix-loop-helix protein 9) (bHLH9) (AtbHLH009) (Shortunder red-light 2)5e-2At1g10120DNA binding / transcription factorO.I.H.G.S.X.
0.3846.90.90Os01g0653200AK110920.1-Glycosyl transferase, group 1 domain containingprotein9e-1At1g71910unknown proteinO.I.H.G.S.X.
0.3644.00.92Os05g0355900AK063096.1-Hypothetical protein4e-1At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.3541.70.89Os08g0493800AK110374.1-Protein kinase domain containing protein2e-3At5g56040leucine-rich repeat protein kinase, putativeO.I.H.G.S.X.
0.3236.30.91Os08g0245900CB673031-NB-ARC domain containing protein3e-1At1g13910leucine-rich repeat family proteinO.I.H.G.S.X.
0.3236.30.85Os06g03477009634.m02365--5e-4At4g37940AGL21O.I.H.G.S.X.
0.3134.50.89Os10g0394000AK110763.1-Lipolytic enzyme, G-D-S-L family protein3e+0At4g30820cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-relatedO.I.H.G.S.X.
0.2931.10.92Os11g04966009639.m02747--4e-4At5g50570squamosa promoter-binding protein, putativeO.I.H.G.S.X.
0.2727.50.91Os08g04867009636.m03821-Conserved hypothetical protein7e-3At5g67060HEC1 (HECATE 1)O.I.H.G.S.X.
0.2727.50.90Os10g0578200AK110534.1-Cellulose synthase-95e-41At5g16910CSLD2 (CELLULOSE-SYNTHASE LIKE D2)O.I.H.G.S.X.
0.2727.50.91Os01g0854800AK109676.1-Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)(P450-dependent fatty acid omega-hydroxylase)3e-10At4g00360CYP86A2 (CYTOCHROME P450 86 A2)O.I.H.G.S.X.
0.2524.10.87Os08g0462800AK108845.1-Protein of unknown function DUF716 family protein2e-1At3g55880unknown proteinO.I.H.G.S.X.
0.2524.10.88Os11g0572200AK109785.1-Hypothetical protein1e+0At3g05730-O.I.H.G.S.X.
0.2524.10.88Os09g0497900AK102511.1-No apical meristem (NAM) protein domain containingprotein1e-21At3g18400anac058 (Arabidopsis NAC domain containing protein 58)O.I.H.G.S.X.
0.2524.10.91Os02g0111800AK111191.1-Protein kinase domain containing protein7e-3At1g08590CLAVATA1 receptor kinase (CLV1)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.499.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.699.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.699.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.898.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.298.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.498.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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