Co-expression analysis

Gene ID Os04g0491500
Gene name
Homology with ArabidopsisSimilar to At4g21680: proton-dependent oligopeptide transport (POT) family protein (HF=2e-2)
Module size 6 genes
NF 0.46
%ile 58.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.93Os04g0491500AK101116.1-TGF-beta receptor, type I/II extracellular regionfamily protein2e-2At4g21680proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.5068.00.93Os01g0551800NM_193415.1-Conserved hypothetical protein2e-3At5g24310ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3)O.I.H.G.S.X.
0.4660.90.93Os02g0715000AK060534.1-Cysteine proteinase GP-II (EC 3.4.22.-)4e-5At1g20850XCP2 (xylem cysteine peptidase 2)O.I.H.G.S.X.
0.4051.10.93Os10g01144009638.m00154-Protein kinase domain containing protein5e-10At2g01950BRL2 (BRI1-LIKE 2)O.I.H.G.S.X.
0.4051.10.93Os12g0512400AK065758.1-Hypothetical protein2e+0At5g01430Got1-like family proteinO.I.H.G.S.X.
0.2117.90.93Os12g0118900AK062692.1-Cytochrome P450 family protein1e-7At5g08139zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.499.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
21.699.2GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.699.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.898.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.298.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.498.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.398.7GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the barley gene, HVSMEn0007E04f2_at, orthologous to the query gene, Os04g0491500

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6380.3HVSMEn0007E04f2_atAt4g21680--4e+0At5g42591unknown proteinO.I.H.G.S.X.
0.4255.2Contig10166_atAt4g21680--1e-1At5g61760ATIPK2BETAO.I.H.G.S.X.
0.3342.6Contig9152_atAt4g21680--4e-1At3g59370unknown proteinO.I.H.G.S.X.
0.097.4Contig13744_atAt4g21680--1e+0At5g04430BTR1L (BINDING TO TOMV RNA 1L (LONG FORM))O.I.H.G.S.X.
0.086.5Contig2521_s_atAt4g21680--4e-21At1g07770RPS15A (ribosomal protein s15a)O.I.H.G.S.X.
0.043.4rbags20m01_atAt4g21680--6e-9At5g26860LON1 (LON PROTEASE 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage