Co-expression analysis

Gene ID Os04g0474300
Gene name
Homology with ArabidopsisSimilar to At5g54570: BGLU41 (BETA GLUCOSIDASE 41) (HF=1e-1)
Module size 6 genes
NF 0.31
%ile 33.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.20.91Os04g0474300AK066908.1-Conserved hypothetical protein1e-1At5g54570BGLU41 (BETA GLUCOSIDASE 41)O.I.H.G.S.X.
0.5068.00.93Os04g0622600AB002266.1-XA13e+0At5g13470unknown proteinO.I.H.G.S.X.
0.4355.40.91Os01g0272600AK067786.1-Conserved hypothetical protein5e-8At5g13500unknown proteinO.I.H.G.S.X.
0.2931.10.93Os12g0281300AK071926.1-Pi-ta protein3e-2At4g36500unknown proteinO.I.H.G.S.X.
0.1611.30.92Os11g0445300AK073557.1-Protein kinase domain containing protein2e-5At5g06740lectin protein kinase family proteinO.I.H.G.S.X.
0.1510.30.93Os01g0827600AK122173.1-Exo70 exocyst complex subunit family protein6e-6At3g14090ATEXO70D3 (exocyst subunit EXO70 family protein D3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.799.4GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.798.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
10.398.1GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
8.997.8GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.497.7GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.797.6GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0711GO:0009620A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a fungus.Link to AmiGO
0.0151GO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.Link to AmiGO
0.0121GO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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