Co-expression analysis

Gene ID Os04g0466100
Gene name
Homology with ArabidopsisSimilar to At3g02450: cell division protein ftsH, putative (HF=3e-7)
Module size 6 genes
NF 0.51
%ile 67.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4762.30.95Os04g0466100AK064543.1-Cell division protein FtsH-like protein3e-7At3g02450cell division protein ftsH, putativeO.I.H.G.S.X.
0.7189.60.95Os09g0363100AK065958.1-Protein of unknown function UPF0044 family protein4e-4At4g29750RNA bindingO.I.H.G.S.X.
0.6787.20.95Os03g0334100AK120587.1-Hypothetical protein8e-1At3g44755unknown proteinO.I.H.G.S.X.
0.6079.70.96Os08g0407000CB658542-ab initio prediction with EST support8e-6At1g78010tRNA modification GTPase, putativeO.I.H.G.S.X.
0.5068.00.95Os01g0960300BI813093-Glucose inhibited division protein A7e+0At5g57510unknown proteinO.I.H.G.S.X.
0.2831.10.94Os10g0509000CB676092-DNA mismatch repair protein MutS, C-terminaldomain containing protein2e-8At5g54090DNA mismatch repair MutS family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.299.0GSM304669Control for the stable mutant rice line (1)GSE12069Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertionLink to GEO
14.198.5GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.198.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.998.4GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.698.4GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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