Co-expression analysis

Gene ID Os04g0465900
Gene name
Homology with ArabidopsisSimilar to At5g01850: protein kinase, putative (HF=7e-1)
Module size 39 genes
NF 0.38
%ile 44.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9699.70.99Os04g04659009632.m03707-Protein kinase domain containing protein7e-1At5g01850protein kinase, putativeO.I.H.G.S.X.
0.6281.50.99Os04g0343900AK107841.1-Conserved hypothetical protein3e-1At1g18760zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5777.00.99Os01g07851019629.m05644--2e-1At4g31380FLP1 (FPF1-LIKE PROTEIN 1)O.I.H.G.S.X.
0.5471.90.99Os08g0511200AK112104.1-RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein3e+0At5g26594ARR24 (Arabidopsis response regulator 24)O.I.H.G.S.X.
0.5471.90.99Os02g05147009630.m02978-Dihydrolipoamide succinyltransferase familyprotein1e-11At5g550702-oxoacid dehydrogenase family proteinO.I.H.G.S.X.
0.5371.30.99Os04g03001509632.m02168--3e+0At3g49180RID3 (ROOT INITIATION DEFECTIVE 3)O.I.H.G.S.X.
0.5168.70.99Os09g0427100AK100693.1-Hypothetical protein7e-1At1g14685BPC2 (BASIC PENTACYSTEINE 2)O.I.H.G.S.X.
0.5068.00.99Os09g0420200AK068903.1-Conserved hypothetical protein3e+0At4g35220cyclase family proteinO.I.H.G.S.X.
0.4863.70.99Os05g04178009633.m03199--2e-2At3g06778heat shock protein binding / unfolded protein bindingO.I.H.G.S.X.
0.4863.70.99Os05g05813009633.m04749-TPR-like domain containing protein3e-3At3g02010pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.4762.30.99Os04g0254300AK120624.1-Conserved hypothetical protein3e+0At4g00060MEE44 (maternal effect embryo arrest 44)O.I.H.G.S.X.
0.4558.80.99Os02g07301009630.m04871-Pre-mRNA processing ribonucleoprotein, bindingregion domain containing protein6e-1At1g60170emb1220 (embryo defective 1220)O.I.H.G.S.X.
0.4355.40.99Os06g05128019634.m03020--2e+0At3g15450unknown proteinO.I.H.G.S.X.
0.4355.40.99Os02g07238009630.m04809--3e-1At3g45210unknown proteinO.I.H.G.S.X.
0.4152.40.99Os05g02850509633.m01901--3e+0At4g21540SPHK1 (SPHINGOSINE KINASE 1)O.I.H.G.S.X.
0.4051.10.99Os02g01571009630.m00554-Leucine-rich repeat, plant specific containingprotein4e+0At5g54220-O.I.H.G.S.X.
0.4051.10.99Os06g0573800AK106254.1-Hypothetical protein3e+0At5g07840ankyrin repeat family proteinO.I.H.G.S.X.
0.4051.10.99Os01g0258200NM_187931.1--3e-2At1g77660MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedO.I.H.G.S.X.
0.3948.30.99Os09g01167009637.m00125--1e-1At4g25810XTR6 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6)O.I.H.G.S.X.
0.3846.90.99Os05g02951669633.m02019--1e-1At1g17690unknown proteinO.I.H.G.S.X.
0.3846.90.99Os04g0122000AK064066.1-Leucine-rich repeat, cysteine-containing typecontaining protein2e+0At3g29690transferase-relatedO.I.H.G.S.X.
0.3846.90.99Os05g03008009633.m02088--2e-1At1g23680unknown proteinO.I.H.G.S.X.
0.3745.00.99Os02g06147009630.m03872-SPla/RYanodine receptor SPRY domain containingprotein1e+0At5g62500ATEB1B (END BINDING PROTEIN 1B)O.I.H.G.S.X.
0.3745.00.99Os02g03053009630.m01933-Disease resistance protein family protein1e+0At2g32720CB5-B (CYTOCHROME B5 ISOFORM B)O.I.H.G.S.X.
0.3745.00.99Os06g07164009634.m04914--4e+0Atmg01180-O.I.H.G.S.X.
0.3541.70.99Os01g0317901NM_183755.1--8e-1At4g04260bromo-adjacent homology (BAH) domain-containing proteinO.I.H.G.S.X.
0.3541.70.99Os02g03321009630.m02194--6e-1At5g67640unknown proteinO.I.H.G.S.X.
0.3236.30.99Os01g0149300NM_184369.1--2e+0At3g25720-O.I.H.G.S.X.
0.3236.30.99Os01g0977000NM_189509.1--1e-1At2g13770unknown proteinO.I.H.G.S.X.
0.3236.30.99Os11g05607009639.m03187--5e-1At2g44690ARAC9O.I.H.G.S.X.
0.3134.50.99Os02g0452000AK063452.1-Hypothetical protein1e+0At5g09480hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.3032.70.99Os01g02740009635.m01900--1e-1At1g01350nucleic acid binding / protein binding / zinc ion bindingO.I.H.G.S.X.
0.2931.10.99Os03g03594009631.m02386--5e+0At1g76840unknown proteinO.I.H.G.S.X.
0.2831.10.99Os02g04872009630.m02721--3e-1At4g33740unknown proteinO.I.H.G.S.X.
0.2727.50.99Os10g04361009638.m02565--5e-1At2g35300late embryogenesis abundant group 1 domain-containing protein / LEA group 1 domain-containing proteinO.I.H.G.S.X.
0.2422.40.99Os11g04457009639.m02309--4e+0At4g26240unknown proteinO.I.H.G.S.X.
0.2321.20.99Os06g05028009632.m02370-Hypothetical plant protein family protein6e-2At3g57320unknown proteinO.I.H.G.S.X.
0.2117.90.99Os11g05344009639.m03000--3e+0At4g01935unknown proteinO.I.H.G.S.X.
0.1813.70.99Os04g0200600NM_195699.1--1e-1At1g32240KAN2 (KANADI 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
28.899.6GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
26.199.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.298.7GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
13.798.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.498.5GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.798.4GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.398.3GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0151GO:0006278The process whereby new strands of DNA are synthesized, using RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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