| Gene ID | Os04g0459500 |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g12900: GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2) (HF=6e-11) |
| Module size | 6 genes |
| NF | 0.58 |
| %ile | 78.7 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.9 | 0.98 | Os04g0459500 | AK071685.1 | - | GADPH (383 AA) (Fragment) | 6e-11 | At1g12900 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2) | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.98 | Os06g0608700 | AK064989.1 | - | Fructose-bisphosphate aldolase, class-I familyprotein | 1e-36 | At4g26530 | fructose-bisphosphate aldolase, putative | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.98 | Os03g0129300 | CB644543 | - | Glyceraldehyde-3-phosphate dehydrogenase (EC1.2.1.13) (Fragment) | 2e-29 | At1g42970 | GAPB (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT) | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | 0.97 | Os08g0104600 | D30763.1 | - | Ferredoxin I, chloroplast precursor (Anti-diseaseprotein 1) | 6e-33 | At4g24190 | SHD (SHEPHERD) | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | 0.99 | Os02g0698000 | CB652033 | - | Phosphoribulokinase, chloroplast precursor (EC2.7.1.19) (Phosphopentokinase) (PRKASE) (PRK) | 1e-32 | At1g32060 | PRK (PHOSPHORIBULOKINASE) | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | 0.98 | Os05g0496200 | AK062214.1 | - | - | 1e-73 | At1g56190 | phosphoglycerate kinase, putative | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 16.6 | 98.8 | GSM159219 | Seed (S5, 21 - 29 dap), biological rep 1 | GSE6893 | Expression data for reproductive development in rice | |
| 15.7 | 98.7 | GSM159220 | Seed (S5, 21 - 29 dap), biological rep 2 | GSE6893 | Expression data for reproductive development in rice | |
| 13.8 | 98.5 | GSM159221 | Seed (S5, 21 - 29 dap), biological rep 3 | GSE6893 | Expression data for reproductive development in rice | |
| 9.8 | 98.0 | GSM159218 | Seed (S4, 11 - 20 dap), biological rep 3 | GSE6893 | Expression data for reproductive development in rice | |
| 8.4 | 97.7 | GSM159216 | Seed (S4, 11 - 20 dap), biological rep 1 | GSE6893 | Expression data for reproductive development in rice | |
| 8.3 | 97.7 | GSM302915 | emb6D_rep2 | GSE11966 | Expression data from rice embryo,endosperm,root,leaf and seedling | |
| 7.0 | 97.4 | GSM159217 | Seed (S4, 11 - 20 dap), biological rep 2 | GSE6893 | Expression data for reproductive development in rice | |
| 6.9 | 97.3 | GSM377072 | Genomic DNA - 45 day old leaf sample - mutant d1137 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 6.8 | 97.3 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 6.5 | 97.2 | GSM302914 | emb6D_rep1 | GSE11966 | Expression data from rice embryo,endosperm,root,leaf and seedling | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.130 | 3 | GO:0006096 | The chemical reactions and pathways resulting in the breakdown of a monosaccharide (generally glucose) into pyruvate, with the concomitant production of a small amount of ATP. Pyruvate may be converted to ethanol, lactate, or other small molecules, or fed into the TCA cycle. |  |
| 0.015 | 1 | GO:0009058 | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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