Co-expression analysis

Gene ID Os04g0435100
Gene name
Homology with ArabidopsisSimilar to At4g38260: unknown protein (HF=1e+0)
Module size 8 genes
NF 0.02
%ile 1.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5068.00.77Os04g0435100AK068521.1-Amino acid/polyamine transporter I family protein1e+0At4g38260unknown proteinO.I.H.G.S.X.
0.3134.50.80Os02g0575000AK121198.1-Conserved hypothetical protein3e-1At3g60410unknown proteinO.I.H.G.S.X.
0.1510.30.77Os01g0716500AK101454.1-SAM (and some other nucleotide) binding motifdomain containing protein2e+0At4g22530embryo-abundant protein-relatedO.I.H.G.S.X.
0.138.20.82Os09g0379900AK105910.1-Glycoside hydrolase, family 81 protein6e-6At5g15870glycosyl hydrolase family 81 proteinO.I.H.G.S.X.
0.094.90.77Os07g0621800AK071704.1-Zinc-containing alcohol dehydrogenase superfamilyprotein7e-1At5g43940HOT5 (sensitive to hot temperatures 5)O.I.H.G.S.X.
0.021.00.78Os12g0578400AK060767.1-Glycoside hydrolase, family 79, N-terminal domaincontaining protein3e-4At5g61250AtGUS1 (Arabidopsis thaliana glucuronidase 1)O.I.H.G.S.X.
0.010.50.77Os05g0522600AK072881.1-Leucine-rich repeat, plant specific containingprotein3e-2At1g48480RKL1O.I.H.G.S.X.
0.010.50.78Os01g0708500AK061091.1-Conserved hypothetical protein 730 family protein1e-8At4g35190unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.298.0GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
7.897.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
6.797.3GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.797.3GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.397.2GSM159212Seed (S2, 3 - 4 dap), biological rep 3GSE6893Expression data for reproductive development in riceLink to GEO
5.997.0GSM159210Seed (S2, 3 - 4 dap), biological rep 1GSE6893Expression data for reproductive development in riceLink to GEO
5.897.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.796.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.696.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0401GO:0006865The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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