| Gene ID | Os04g0410400 |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g13200: GRAM domain-containing protein / ABA-responsive protein-related (HF=1e+1) |
| Module size | 21 genes |
| NF | 0.54 |
| %ile | 71.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.69 | 87.9 | 0.84 | Os04g0410400 | AK108077.1 | - | Root cap family protein | 1e+1 | At5g13200 | GRAM domain-containing protein / ABA-responsive protein-related | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | 0.90 | Os03g0320100 | CF280794 | - | Alpha-L-arabinofuranosidase, C-terminal domaincontaining protein | 1e-15 | At3g10740 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1) | O.I. | H.G. | S.X. | |
| 0.65 | 83.8 | 0.87 | Os11g0138900 | AK059449.1 | - | Esterase/lipase/thioesterase domain containingprotein | 2e-1 | At2g05510 | glycine-rich protein | O.I. | H.G. | S.X. | |
| 0.59 | 78.0 | 0.89 | Os09g0280500 | AK106988.1 | - | Basic-leucine zipper (bZIP) transcription factordomain containing protein | 7e-2 | At3g12250 | TGA6 (TGACG MOTIF-BINDING FACTOR 6) | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | 0.87 | Os05g0276500 | U30479.1 | - | Expansin Os-EXPA3 | 5e-1 | At2g39700 | ATEXPA4 (ARABIDOPSIS THALIANA EXPANSIN A4) | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | 0.88 | Os04g0684300 | AK105205.1 | - | Hypothetical protein | 2e+1 | Atcg00560 | - | O.I. | H.G. | S.X. | |
| 0.56 | 76.3 | 0.89 | Os09g0293500 | 9637.m00942 | - | BRASSINOSTEROID INSENSITIVE 1 precursor (EC2.7.1.37) (AtBRI1) (Brassinosteroid LRR receptor kinase) | 9e-15 | At3g13380 | BRL3 (BRI1-LIKE 3) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | 0.88 | Os08g0477500 | AU033142 | - | S.tuberosum patatin (Fragment) | 2e+0 | At1g28280 | VQ motif-containing protein | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | 0.87 | Os07g0630400 | AK060320.1 | - | Ribonuclease T2 family protein | 2e+0 | At3g22580 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | O.I. | H.G. | S.X. | |
| 0.54 | 71.9 | 0.87 | Os10g0555700 | U95968.1 | - | Major pollen allergen Lol pI family protein | 3e+0 | At2g44310 | calcium-binding EF hand family protein | O.I. | H.G. | S.X. | |
| 0.54 | 71.9 | 0.88 | Os03g0245500 | AK064707.1 | - | Curculin-like (mannose-binding) lectin domaincontaining protein | 1e+1 | At5g53560 | CB5-E (CYTOCHROME B5 ISOFORM E) | O.I. | H.G. | S.X. | |
| 0.53 | 71.3 | 0.87 | Os08g0245200 | AK069932.1 | - | 4-coumarate--CoA ligase 1 (EC 6.2.1.12) (4CL 1)(4-coumaroyl-CoA synthase 1) | 3e-10 | At3g21240 | 4CL2 (4-COUMARATE:COA LIGASE 2) | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | 0.90 | Os01g0652300 | AK063136.1 | - | Hypothetical protein | 5e+0 | At1g30475 | - | O.I. | H.G. | S.X. | |
| 0.48 | 63.7 | 0.89 | Os07g0193000 | 9635.m00915 | - | HIPL1 protein precursor | 3e-1 | At5g62630 | HIPL2 (HIPL2 PROTEIN PRECURSOR) | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.88 | Os01g0678800 | AK062840.1 | - | Heavy metal transport/detoxification proteindomain containing protein | 3e-1 | At1g20220 | nucleic acid binding | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | 0.89 | Os09g0249000 | AK072805.1 | - | - | 6e-1 | At1g11220 | unknown protein | O.I. | H.G. | S.X. | |
| 0.45 | 58.8 | 0.88 | Os02g0157600 | 9630.m00558 | - | Rhodanese-like domain containing protein | 6e+0 | At5g66190 | FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1) | O.I. | H.G. | S.X. | |
| 0.45 | 58.8 | 0.87 | Os03g0368900 | AK120411.1 | - | Haem peroxidase, plant/fungal/bacterial familyprotein | 1e-2 | At5g64120 | peroxidase, putative | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | 0.90 | Os08g0417100 | CR283653 | - | Isopenicillin N synthase family protein | 4e+0 | At5g43850 | ARD4 | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | 0.90 | Os01g0218100 | AK068593.1 | - | Basic helix-loop-helix dimerisation region bHLHdomain containing protein | 1e+0 | At5g24890 | unknown protein | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | 0.92 | Os04g0311400 | AK121305.1 | - | Cysteine proteinase 1 precursor (EC 3.4.22.-) | 3e-13 | At4g39090 | RD19 (RESPONSIVE TO DEHYDRATION 19) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 51.7 | 99.9 | GSM422676 | Control | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 41.2 | 99.9 | GSM422672 | Drought | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 10.2 | 98.0 | GSM422674 | Musa_DNA_RICE | GSE16865 | Heterologous microarrays for the study of drought stress in Musa | |
| 9.8 | 98.0 | GSM377070 | Genomic DNA - 45 day old leaf sample - mutant d1 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 9.2 | 97.9 | GSM377075 | Genomic DNA - 45 day old leaf sample - mutant g650 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.8 | 97.8 | GSM377082 | Genomic DNA - 45 day old leaf sample - mutant g9799 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.7 | 97.8 | GSM377080 | Genomic DNA - 45 day old leaf sample - mutant g6728 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.6 | 97.8 | GSM377077 | Genomic DNA - 45 day old leaf sample - mutant g6489 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.5 | 97.7 | GSM377081 | Genomic DNA - 45 day old leaf sample - mutant g7534 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| 8.3 | 97.7 | GSM377073 | Genomic DNA - 45 day old leaf sample - mutant d2943 | GSE15071 | Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays | |
| SF | Genes | GO ID | Process Name | Link to AmiGO |
|---|---|---|---|---|
| 0.019 | 1 | GO:0006979 | A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. |  |
| 0.018 | 1 | GO:0006278 | The process whereby new strands of DNA are synthesized, using RNA as a template for RNA-dependent DNA polymerases (e.g. reverse transcriptase) that synthesize the new strands. | |
| 0.018 | 1 | GO:0006310 | Any process by which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction. | |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
| Zea_mays |
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