Co-expression analysis

Gene ID Os04g0401800
Gene name
Homology with ArabidopsisSimilar to At5g65180: - (HF=2e-1)
Module size 7 genes
NF 0.12
%ile 9.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4660.90.91Os04g0401800AK103868.1-DNA repair metallo-beta-lactamase domaincontaining protein2e-1At5g65180-O.I.H.G.S.X.
0.4660.90.92Os08g03697009636.m02793-HesB/YadR/YfhF family protein7e-5At5g03905hesB-like domain-containing proteinO.I.H.G.S.X.
0.127.20.91Os01g0144600AK061501.1-Hypothetical protein5e-1At5g25220KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3)O.I.H.G.S.X.
0.094.90.92Os07g0673700AK071934.1-Cyclin-like F-box domain containing protein4e+0At3g43583unknown proteinO.I.H.G.S.X.
0.084.20.92Os10g0412000AK066864.1-Phospholipid-translocating P-type ATPase, flippasefamily protein8e-45At1g59820ALA3 (Aminophospholipid ATPase3)O.I.H.G.S.X.
0.084.20.91Os07g0657500AK058476.1--3e-2At5g64905PROPEP3 (Elicitor peptide 3 precursor)O.I.H.G.S.X.
0.042.00.93Os01g0859600AK072151.1-Cyclin-like F-box domain containing protein2e-5At1g67190F-box family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.299.2GSM195227AntherGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
9.497.9GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.297.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.497.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.397.5GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.997.3GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.897.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.597.2GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.8115.1.A1_at, orthologous to the query gene, Os04g0401800

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6382.9GmaAffx.8115.1.A1_atAt5g65180--2e+0At3g25120mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.
0.6181.8Gma.7892.1.A1_atAt5g65180--6e-28At1g74210glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.4463.3GmaAffx.76691.1.A1_atAt5g65180--3e+0At3g15150zinc ion bindingO.I.H.G.S.X.
0.2939.0Gma.15588.2.A1_atAt5g65180--3e+0Atmg01040-O.I.H.G.S.X.
0.2228.1GmaAffx.20309.1.S1_atAt5g65180--4e-11At3g60390HAT3 (HOMEOBOX-LEUCINE ZIPPER PROTEIN 3)O.I.H.G.S.X.
0.024.5Gma.14676.1.A1_atAt5g65180--2e-2At2g22425peptidaseO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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