Co-expression analysis

Gene ID Os04g0382900
Gene name
Homology with ArabidopsisSimilar to At3g18518: RTFL20 (ROTUNDIFOLIA LIKE 20) (HF=2e+0)
Module size 15 genes
NF 0.54
%ile 72.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6987.90.74Os04g0382900AK062807.1-Conserved hypothetical protein2e+0At3g18518RTFL20 (ROTUNDIFOLIA LIKE 20)O.I.H.G.S.X.
0.7289.80.86Os10g0150400CF308064-Protein of unknown function DUF1210 family protein2e+0At5g14340AtMYB40 (myb domain protein 40)O.I.H.G.S.X.
0.7088.40.86Os10g0150600AK072923.1-Protein of unknown function DUF1210 family protein5e-1At2g01760ARR14 (ARABIDOPSIS RESPONSE REGULATOR 14)O.I.H.G.S.X.
0.6787.20.88Os08g0460000AB010876.1-Germin-like protein 5 (Germin-like protein 1)5e-1At3g51060STY1 (STYLISH 1)O.I.H.G.S.X.
0.6583.80.82Os05g0190500AK060968.1-Acid phosphatase (Class B) family protein2e+0At1g20340DRT112O.I.H.G.S.X.
0.6079.70.82Os10g0150800AK061299.1-Protein of unknown function DUF1210 family protein2e+0At5g14340AtMYB40 (myb domain protein 40)O.I.H.G.S.X.
0.6079.70.84Os04g0545600AK119259.1-Uclacyanin 3-like protein2e+0At3g03090AtVGT1 (Arabidopsis thaliana vacuolar glucose transporter 1)O.I.H.G.S.X.
0.5877.00.88Os04g0644400AK061322.1-Proline-rich-like protein6e-1At3g55880unknown proteinO.I.H.G.S.X.
0.5573.70.87Os02g0662100AK058218.1-ZmGR1a protein4e-1At4g12510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4762.30.84Os10g0150700AK067147.1-Protein of unknown function DUF1210 family protein2e+0At5g46060unknown proteinO.I.H.G.S.X.
0.4355.40.87Os02g0647900AK060824.1-Aldehyde dehydrogenase domain containing protein3e-1At5g48690-O.I.H.G.S.X.
0.4051.10.81Os03g0339300AK061545.1-Peroxidase (EC 1.11.1.7)5e-1At1g14550anionic peroxidase, putativeO.I.H.G.S.X.
0.4051.10.85Os03g0658800AK065238.1-Cytochrome P450 family protein2e-5At4g15310CYP702A3O.I.H.G.S.X.
0.3644.00.77Os05g0163300AK105598.1-Beta-Ig-H3/fasciclin domain containing protein6e-1At1g29420-O.I.H.G.S.X.
0.2931.10.79Os12g0561900AK121202.1-Conserved hypothetical protein9e-1At1g02813unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.899.5GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
9.798.0GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.697.9GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.497.9GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.297.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.897.8GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.997.6GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
7.897.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0561GO:0007155The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.Link to AmiGO
0.0301GO:0006464The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).Link to AmiGO
0.0201GO:0006979A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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