Co-expression analysis

Gene ID Os04g0351300
Gene name
Homology with ArabidopsisSimilar to At5g57740: XBAT32 (HF=1e+0)
Module size 11 genes
NF 0.34
%ile 37.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8796.60.98Os04g03513009632.m02671-Protein prenyltransferase domain containingprotein1e+0At5g57740XBAT32O.I.H.G.S.X.
0.4458.10.98Os08g0441700AK064195.1-Hypothetical protein5e-2At2g24590splicing factor, putativeO.I.H.G.S.X.
0.3440.00.98Os08g0511000AK107578.1-Protein prenyltransferase domain containingprotein8e-4At3g62890bindingO.I.H.G.S.X.
0.3338.80.99Os03g0674600AK067566.1-Hypothetical protein5e-7At4g37740AtGRF2 (GROWTHREGULATING FACTOR 2)O.I.H.G.S.X.
0.3134.50.99Os04g0531300AK072647.1-Dihydrouridine synthase, DuS family protein6e-20At3g49640FAD binding / catalytic/ tRNA dihydrouridine synthaseO.I.H.G.S.X.
0.2727.50.99Os11g01165009639.m00152-Chloroplastic outer envelope membrane protein(OEP75) precursor (Outer membrane protein)4e-23At3g52850VSR1 (VACUOLAR SORTING RECEPTOR HOMOLOG 1)O.I.H.G.S.X.
0.2727.50.99Os01g01763009629.m00748-TPR-like domain containing protein1e-3At2g42920pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.2422.40.99Os10g0435400AK106669.1-MATH domain containing protein4e-1At3g01390VMA10 (VACUOLAR MEMBRANE ATPASE 10)O.I.H.G.S.X.
0.2321.20.98Os02g0543900AK103887.1-Conserved hypothetical protein2e-2At3g54270sucrose-phosphatase 3 (SPP3)O.I.H.G.S.X.
0.2117.90.99Os01g0509700AK105301.1-Hypothetical protein1e+0At4g34190SEP1 (STRESS ENHANCED PROTEIN 1)O.I.H.G.S.X.
0.1813.70.99Os10g0482500NM_197048.1--1e+0At4g38410dehydrin, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.599.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
15.298.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.898.6GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.798.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.498.6GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.398.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.198.4GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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