Co-expression analysis

Gene ID Os04g0348600
Gene name
Homology with ArabidopsisSimilar to At4g17998: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.73
%ile 95.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.89Os04g03486009632.m02653-Response regulator receiver domain containingprotein2e+0At4g17998unknown proteinO.I.H.G.S.X.
0.8094.60.90Os12g02431009640.m01351-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein9e-1At3g42310unknown proteinO.I.H.G.S.X.
0.7391.10.91Os04g05871009632.m04828-Pectinesterase inhibitor domain containing protein5e+0At5g06330hairpin-responsive protein, putative (HIN1)O.I.H.G.S.X.
0.6787.20.86Os03g0369100AK111061.1-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein1e+0At1g12665-O.I.H.G.S.X.
0.5676.30.86Os11g02227009639.m01096--2e+0At2g38790unknown proteinO.I.H.G.S.X.
0.5371.30.84Os03g0639400AK110764.1-Plant invertase/pectin methylesterase inhibitordomain containing protein4e-1At1g09360invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.999.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
12.498.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.298.2GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.998.1GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.498.1GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.198.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.998.0GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
9.798.0GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage