Co-expression analysis

Gene ID Os04g0347100
Gene name
Homology with ArabidopsisSimilar to At2g33190: F-box family protein (HF=7e+0)
Module size 6 genes
NF 0.41
%ile 51.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.83Os04g0347100AU197402-Conserved hypothetical protein7e+0At2g33190F-box family proteinO.I.H.G.S.X.
0.6181.20.87Os10g0165300NM_195010.1-Cytochrome P450 family protein1e-2At2g45580CYP76C3O.I.H.G.S.X.
0.5068.00.85Os05g0515500AK068905.1-O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)7e-1At1g53625unknown proteinO.I.H.G.S.X.
0.4660.90.82Os11g02355009639.m01223-Herbicide safener binding protein2e+0At1g64840F-box family proteinO.I.H.G.S.X.
0.3846.90.84Os01g0370000AK121554.1-Oxo-phytodienoic acid reductase3e+0At1g14820SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.2016.50.82Os11g0708100AK060544.1-Laccase (EC 1.10.3.2) (Fragment)1e-8At5g01190LAC10 (laccase 10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.699.1GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.799.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.498.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.898.8GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.398.8GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.998.6GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.798.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.098.5GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.598.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.398.4GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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