Co-expression analysis

Gene ID Os04g0295500
Gene name
Homology with ArabidopsisSimilar to At1g65040: protein binding / zinc ion binding (HF=4e-1)
Module size 6 genes
NF 0.50
%ile 66.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.87Os04g0295500AK065384.1-Conserved hypothetical protein4e-1At1g65040protein binding / zinc ion bindingO.I.H.G.S.X.
0.6382.70.88Os02g0178000AK111625.1-SNF1 related protein kinase-like protein6e-11At1g01140CIPK9 (CBL-INTERACTING PROTEIN KINASE 9)O.I.H.G.S.X.
0.5068.00.90Os05g01298009633.m00316-DNA-binding WRKY domain containing protein5e-10At4g24240WRKY7O.I.H.G.S.X.
0.4458.10.91Os07g0619400AK062716.1-Calcium-binding EF-hand domain containing protein9e-2At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.4253.90.88Os08g0113500AK071052.1-No apical meristem (NAM) protein family protein1e-3At2g02450ANAC035 (Arabidopsis NAC domain containing protein 35)O.I.H.G.S.X.
0.2422.40.88Os11g0208900AK111797.1-Leucine rich repeat containing protein kinase5e-1At2g17220protein kinase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
52.499.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
47.399.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.498.6GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.298.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.098.4GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
10.898.1GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.997.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.697.8GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
8.397.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0291GO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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