Co-expression analysis

Gene ID Os04g0244800
Gene name
Homology with ArabidopsisSimilar to At4g38580: ATFP6 (FARNESYLATED PROTEIN 6) (HF=5e-10)
Module size 6 genes
NF 0.44
%ile 56.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.60.89Os04g0244800AK121488.1-Heavy metal transport/detoxification proteindomain containing protein5e-10At4g38580ATFP6 (FARNESYLATED PROTEIN 6)O.I.H.G.S.X.
0.6079.70.87Os01g0846300AK065949.1-Protein phpsphatase 2C (PP2C) (EC 3.1.3.16)9e-1At5g59220protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.5068.00.89Os01g0583100CA757691-Protein phosphatase 2C ABI2 (EC 3.1.3.16) (PP2C)(Abscisic acid- insensitive 2)2e-6At1g72770HAB1 (HOMOLOGY TO ABI1)O.I.H.G.S.X.
0.4458.10.89Os02g0766700AK072062.1-Abscisic acid responsive elements-binding factor(ABA-responsive element binding protein 2) (AREB2)6e-5At2g36270ABI5 (ABA INSENSITIVE 5)O.I.H.G.S.X.
0.2625.60.89Os04g0623300CB618007-Flavin-containing amine oxidase family protein2e-18At2g43020ATPAO2 (Polyamine oxidase 2)O.I.H.G.S.X.
0.2524.10.89Os06g0712300AK058857.1-Phospholipid/glycerol acyltransferase familyprotein6e-30At2g45670calcineurin B subunit-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.697.3GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
6.497.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
5.596.8GSM377086Genomic DNA - 45 day old leaf sample - IR64 wtcheckGSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.896.5GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.196.0GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
4.196.0GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
4.095.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
4.095.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.695.5GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
3.595.3GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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