Co-expression analysis

Gene ID Os04g0187800
Gene name
Homology with ArabidopsisSimilar to At5g37290: armadillo/beta-catenin repeat family protein (HF=3e+0)
Module size 6 genes
NF 0.28
%ile 28.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4355.40.71Os04g01878009632.m00967-Conserved hypothetical protein3e+0At5g37290armadillo/beta-catenin repeat family proteinO.I.H.G.S.X.
0.5068.00.87Os04g0614500AK100259.1-Aminotransferase class-III family protein7e-11At3g22200POP2 (POLLEN-PISTIL INCOMPATIBILITY 2)O.I.H.G.S.X.
0.5068.00.89Os11g0687100CR287582-contains InterPro domain(s): IPR0020354e+0At5g59740UDP-galactose/UDP-glucose transporter-relatedO.I.H.G.S.X.
0.4660.90.71Os11g0687200AK107174.1-Hypothetical protein8e-1At1g53705ATP binding / aminoacyl-tRNA ligase/ nucleotide bindingO.I.H.G.S.X.
0.1712.60.67Os12g0559200BM421235-Lipoxygenase (EC 1.13.11.12)2e+0At5g57750zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.105.70.69Os01g0117600AK065867.1--3e-4At3g07070protein kinase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
64.399.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
31.099.7GSM255762wt collar chipGSE12097antiOsLIC collar chipLink to GEO
26.399.5GSM255763antiOsLIC collar chipGSE12097antiOsLIC collar chipLink to GEO
18.799.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.599.0GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
17.698.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.498.8GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.198.7GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.698.7GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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