CoP: Co-expressed Biological Processes

Co-expression analysis

Gene ID Os04g0158800

Gene name
Homology with Arabidopsis Similar to At1g15400: unknown protein (HF=1e+0)

Module size 8 genes

NF 0.61

%ile 82.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func. Ev AGI code Arabidopsis gene name O.I. H.G. S.X. Other DB
0.75 91.9 0.97 Os04g0158800 9632.m00681 - - 1e+0 At1g15400 unknown protein O.I. H.G. S.X.
0.77 93.1 0.98 Os05g0527833 9633.m04226 - - 8e+0 At5g10695 unknown protein O.I. H.G. S.X.
0.74 91.4 0.97 Os08g0105500 9636.m00045 - - 4e+0 At1g10800 unknown protein O.I. H.G. S.X.
0.71 89.6 0.98 Os02g0695900 AK062910.1 - Hypothetical protein 2e+0 At5g40690 - O.I. H.G. S.X.
0.70 88.4 0.97 Os04g0533800 9632.m04338 - - 2e+0 At1g14549 unknown protein O.I. H.G. S.X.
0.53 71.3 0.98 Os03g0183900 9631.m00801 - ATPase 10, plasma membrane-type (EC 3.6.3.6)(Proton pump 10) 2e-30 At1g17260 AHA10 (Autoinhibited H(+)-ATPase isoform 10) O.I. H.G. S.X.
0.39 48.3 0.98 Os10g0124600 9638.m00268 - - 4e-1 At1g43900 protein phosphatase 2C, putative / PP2C, putative O.I. H.G. S.X.
0.38 46.9 0.97 Os08g0141200 9636.m00386 - - 9e-1 At5g38300 unknown protein O.I. H.G. S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
43.2 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
12.9 98.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.0 98.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.4 98.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.1 98.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.9 98.1 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.8 98.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF Genes GO ID Process Name Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays

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