Co-expression analysis

Gene ID	Os04g0156200
Gene name
Homology with Arabidopsis	Similar to At1g64330: myosin heavy chain-related (HF=7e-2)
Module size	6 genes
NF	0.64
%ile	87.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.2	0.89	Os04g0156200	9632.m00640	-	Ribulose-phosphate binding barrel domaincontaining protein	7e-2	At1g64330	myosin heavy chain-related	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.80	94.6	0.93	Os02g0831500	AK061268.1	-	Sucrose synthase (EC 2.4.1.13) (Sucrose-UDPglucosyltransferase) (Fragment)	3e+0	At5g20830	SUS1 (SUCROSE SYNTHASE 1)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.60	79.7	0.92	Os06g0681300	AK058781.1	-	PAK-box/P21-Rho-binding domain containing protein	7e+0	At5g06450	nucleic acid binding	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.53	71.3	0.90	Os04g0223300	AY382617.1	-	Peroxisome type ascorbate peroxidase	1e-7	At4g35000	APX3 (ASCORBATE PEROXIDASE 3)	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	68.0	0.93	Os11g0462100	AK102820.1	-	Glycoside hydrolase, family 18 protein	8e-1	At3g01010	UDP-glucose/GDP-mannose dehydrogenase family protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.46	60.9	0.92	Os01g0728100	AK070946.1	-	Lipolytic enzyme, G-D-S-L family protein	1e-3	At1g29660	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
63.9	99.9	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
12.4	98.3	GSM159264	Drought stress, biological rep 3	GSE6901	Expression data for stress treatment in rice seedlings
12.0	98.3	GSM377081	Genomic DNA - 45 day old leaf sample - mutant g7534	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9	98.3	GSM159262	Drought stress, biological rep 1	GSE6901	Expression data for stress treatment in rice seedlings
11.6	98.2	GSM159263	Drought stress, biological rep 2	GSE6901	Expression data for stress treatment in rice seedlings
10.8	98.1	GSM422676	Control	GSE16865	Heterologous microarrays for the study of drought stress in Musa
10.7	98.1	GSM377070	Genomic DNA - 45 day old leaf sample - mutant d1	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6	98.1	GSM377078	Genomic DNA - 45 day old leaf sample - mutant g6603	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.1	98.0	GSM377080	Genomic DNA - 45 day old leaf sample - mutant g6728	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.1	98.0	GSM377082	Genomic DNA - 45 day old leaf sample - mutant g9799	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

Biological processes inferred to relate to the module

SF	Genes	GO ID	Process Name	Link to AmiGO
0.250	1	GO:0005985	The chemical reactions and pathways involving sucrose, the disaccharide fructofuranosyl-glucopyranoside.
0.015	1	GO:0009058	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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