Co-expression analysis

Gene ID Os04g0152000
Gene name
Homology with ArabidopsisSimilar to At5g45530: unknown protein (HF=2e-4)
Module size 6 genes
NF 0.54
%ile 72.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.99Os04g01520009632.m00594--2e-4At5g45530unknown proteinO.I.H.G.S.X.
0.5777.00.99Os12g02114009640.m01026-HhH-GPD family protein7e-1At4g17310unknown proteinO.I.H.G.S.X.
0.5371.30.99Os05g0505900AK106936.1-Hypothetical protein9e-1At3g10040transcription factorO.I.H.G.S.X.
0.4458.10.99Os03g06128009631.m04004--1e+0At3g29305unknown proteinO.I.H.G.S.X.
0.4355.40.99Os07g06928009635.m04977-Protein synthesis initiation factor eIF2 alpha3e-21At2g40290eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putativeO.I.H.G.S.X.
0.3644.00.99Os01g0728000AK106601.1-Hypothetical protein2e-1At3g33187-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.199.7GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
26.999.6GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.298.9GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.498.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.698.6GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.598.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.198.5GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.998.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
13.898.5GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.498.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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