Co-expression analysis

Gene ID Os04g0132500
Gene name
Homology with ArabidopsisSimilar to At3g24240: leucine-rich repeat transmembrane protein kinase, putative (HF=5e-4)
Module size 6 genes
NF 0.65
%ile 87.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.80.90Os04g0132500AK121779.1-Protein kinase domain containing protein5e-4At3g24240leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.6382.70.88Os02g0454500AK064156.1-Membrane bound O-acyl transferase, MBOAT familyprotein5e-5At5g55360long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family proteinO.I.H.G.S.X.
0.6181.20.88Os06g0660200AK101191.1-Auxin efflux carrier component 2 (AtPIN2) (Auxinefflux carrier AGR) (Polar-auxin-transport effluxcomponent AGRAVITROPIC 1) (AtAGR1) (Ethylene insensitiveroot 1) (AtEIR1) (WAVY6)1e-15At1g70940PIN3 (PIN-FORMED 3)O.I.H.G.S.X.
0.5068.00.90Os08g0253800AK108045.1-Glycosyl transferase, family 2 domain containingprotein7e-14At4g31590ATCSLC5 (CELLULOSE-SYNTHASE LIKE C5)O.I.H.G.S.X.
0.4458.10.90Os04g0128900AK068976.1-Flavin monoxygenase-like protein floozy3e-1At5g11320YUC4 (YUCCA4)O.I.H.G.S.X.
0.4051.10.90Os03g0563600AK122030.1-Peroxidase 56 precursor (EC 1.11.1.7) (AtperoxP56) (ATP33)2e-1At5g15180peroxidase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
76.699.9GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
24.599.4GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
23.299.3GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
18.699.0GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
18.398.9GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
16.098.7GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.798.7GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.798.7GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
15.198.6GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
14.998.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage