Co-expression analysis

Gene ID Os04g0127300
Gene name
Homology with ArabidopsisSimilar to At4g10520: subtilase family protein (HF=3e-1)
Module size 7 genes
NF 0.08
%ile 6.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7591.90.78Os04g0127300AK062269.1-Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein3e-1At4g10520subtilase family proteinO.I.H.G.S.X.
0.3644.00.79Os11g0661900AK064062.1-Hypothetical protein8e-1At5g57640-O.I.H.G.S.X.
0.3644.00.88Os08g0112900AK105876.1-Lipolytic enzyme, G-D-S-L family protein1e-2At1g71691GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.094.90.88Os03g0239000AK061284.1-Glycoside hydrolase, family 16 domain containingprotein2e-4At1g32170XTR4 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 4)O.I.H.G.S.X.
0.042.00.79Os01g0954900AK110957.1-Peptidase A1, pepsin family protein3e-3At5g07030aspartic-type endopeptidaseO.I.H.G.S.X.
0.042.00.83Os07g0658600CK738634-Radc11e-8At5g07030aspartic-type endopeptidaseO.I.H.G.S.X.
0.042.00.83Os01g0182700AY341853.1-WRKY transcription factor 341e-2At2g44745WRKY family transcription factorO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.998.1GSM431932Root- -Fe-P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
10.698.1GSM431931Root- -Fe-P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
6.497.2GSM431930Root- +Fe-P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
6.497.2GSM431929Root- +Fe-P biological rep1GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlingsLink to GEO
5.897.0GSM195224Suspension cellGSE7951Genome-wide gene expression profiling of rice stigmaLink to GEO
5.396.7GSM278851KT95-418-RSV infected,biological rep2GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infectionLink to GEO
4.496.2GSM278850KT95-418-RSV infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infectionLink to GEO
4.095.9GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in riceLink to GEO
3.895.7GSM375765gid1-3_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in riceLink to GEO
3.395.1GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in riceLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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