Co-expression analysis

Gene ID Os04g0116800
Gene name
Homology with ArabidopsisSimilar to At5g24313: unknown protein (HF=5e-2)
Module size 6 genes
NF 0.00
%ile 0.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.90.67Os04g0116800AK119922.1-Naringenin-chalcone synthase family protein5e-2At5g24313unknown proteinO.I.H.G.S.X.
0.010.50.71Os01g0378100NM_193889.1-Peroxidase precursor (EC 1.11.1.7)1e-2At5g15180peroxidase, putativeO.I.H.G.S.X.
-0.10.67Os08g0403300AU096789-Heavy metal transport/detoxification proteindomain containing protein1e-2At5g17450heavy-metal-associated domain-containing protein / copper chaperone (CCH)-relatedO.I.H.G.S.X.
-0.10.76Os10g0349900AK062848.1-Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein5e-3At1g12090ELP (EXTENSIN-LIKE PROTEIN)O.I.H.G.S.X.
-0.10.67Os08g0172300AK111274.1-HAT dimerisation domain containing protein2e+0At3g04150germin-like protein, putativeO.I.H.G.S.X.
-0.10.72Os07g0222200AK107502.1-Protein of unknown function DUF594 family protein4e-4At2g39830DAR2 (DA1-RELATED PROTEIN 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
69.299.9GSM422672DroughtGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
30.299.7GSM422676ControlGSE16865Heterologous microarrays for the study of drought stress in MusaLink to GEO
14.998.6GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.698.4GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
12.598.3GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.898.3GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.798.2GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.598.2GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO
11.098.2GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarraysLink to GEO

Biological processes inferred to relate to the module

SFGenesGO IDProcess NameLink to AmiGO
0.0281GO:0030001The directed movement of metal ions, any metal ion with an electric charge, into, out of, within or between cells.Link to AmiGO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage